Pairwise Orthologs for ORYLA07870

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene ORYLA07870 (ENSORLG00000005010)

E Oryzias latipes

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO00757		A0A401P3H0
			E	Anguilla anguilla	ANGAN06621		XP_035261253
			E	Anabas testudineus	ANATE32844		ENSATEG00000021371.1
			E	Seriola dumerili	SERDU04877		A0A3B4VII9
			E	Echeneis naucrates	ECHNA46565		A0A665W1Q7
			E	Cynoglossus semilaevis	CYNSE27161		A0A3P8V4M3
			E	Scophthalmus maximus	SCOMX12533		ENSSMAG00000019131.1
			E	Dicentrarchus labrax	DICLA25222		A0A8C4HUB4
			E	Gasterosteus aculeatus	GASAC03441		G3NTZ8
			E	Sparus aurata	SPAAU31112		A0A671WTU0
			E	Mola mola	MOLML12284		A0A3Q3WTK8
			E	Takifugu rubripes	TAKRU25202		H2TSV7
			E	Tetraodon nigroviridis	TETNG08230		H3C4F3
			E	Oryzias javanicus	ORYJA10649		A0A437CAJ0
			E	Nothobranchius furzeri	NOTFU19912		A0A1A8A5N9
			E	Kryptolebias marmoratus	KRYMA02546		A0A3Q3BIY5
			E	Cyprinodon variegatus	CYPVA24615		A0A3Q2CRS8
			E	Gambusia affinis	GAMAF06352		ENSGAFG00000002237.1
			E	Poecilia formosa	POEFO16923		A0A087Y306
			E	Poecilia reticulata	POERE14267		A0A3P9QH94
			E	Xiphophorus maculatus	XIPMA00587		A0A3B5QTS2
			E	Salarias fasciatus	SALFA42781		A0A672JG56
			E	Astatotilapia calliptera	ASTCA28687		A0A3P8PTH1
			E	Haplochromis burtoni	HAPBU13207		A0A3Q2V9P2
			E	Neolamprologus brichardi	NEOBR11055		A0A3Q4N0W8

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