Pairwise Orthologs for ORYJA20864

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene ORYJA20864 (A0A3S2N732)

E Oryzias javanicus | UDP-N-acetylglucosamine 2-epimerase domain-contain

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Eptatretus burgeri	EPTBU09557		A0A8C4WZV5
			E	Chiloscyllium punctatum	CHIPU20680		A0A401RKN0
			E	Callorhinchus milii	CALMI13458		A0A4W3J0S9
			E	Lepisosteus oculatus	LEPOC12834		W5MZ88
			E	Anguilla anguilla	ANGAN21294		XP_035273555
			E	Anabas testudineus	ANATE15815		ENSATEG00000007868.1
			E	Seriola dumerili	SERDU18219		A0A3B4U7T7
			E	Echeneis naucrates	ECHNA14829		A0A665TH50
			E	Cynoglossus semilaevis	CYNSE30582		A0A3P8VY57
			E	Scophthalmus maximus	SCOMX31337		ENSSMAG00000018741.1
			E	Dicentrarchus labrax	DICLA44764		A0A8C4E0Z5
			E	Gasterosteus aculeatus	GASAC16574		G3Q3Z3
			E	Sparus aurata	SPAAU55306		A0A671UWQ2
			E	Mola mola	MOLML24377		A0A3Q3XS03
			E	Takifugu rubripes	TAKRU16951		A0A674NX65
			E	Tetraodon nigroviridis	TETNG07012		H3DL37
			E	Oryzias latipes	ORYLA19511		A0A3B3HN75
			E	Oryzias melastigma	ORYME29165		ENSOMEG00000007833.1
			E	Nothobranchius furzeri	NOTFU02088		A0A1A8AY86
			E	Kryptolebias marmoratus	KRYMA17114		A0A3Q3GYN6
			E	Cyprinodon variegatus	CYPVA05672		A0A3Q2DEJ5
			E	Gambusia affinis	GAMAF23363		ENSGAFG00000016608.1
			E	Poecilia formosa	POEFO15044		A0A087XPG1
			E	Poecilia reticulata	POERE15690		A0A3P9MSL2
			E	Xiphophorus maculatus	XIPMA29630		A0A3B5QIS2

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