Pairwise Orthologs for OREAU30001

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene OREAU30001 (A0A668RWE7)

E Oreochromis aureus | Brevican

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Salpingoeca rosetta (strain ATCC 50818 / BSB-021)	SALR505420		F2UAA2
			E	Lepisosteus oculatus	LEPOC09683		W5MN85
			E	Anabas testudineus	ANATE07362		A0A3Q1J9M6
			E	Cynoglossus semilaevis	CYNSE06666		A0A3P8VN95
			E	Scophthalmus maximus	SCOMX10168		A0A8D3AZW6
			E	Dicentrarchus labrax	DICLA13930		A0A8C4H0H8
			E	Gasterosteus aculeatus	GASAC01179		G3Q0U1
			E	Sparus aurata	SPAAU58758		A0A671W421
			E	Tetraodon nigroviridis	TETNG16427		H3D620
			E	Oryzias latipes	ORYLA06040		ENSORLG00000015637
			E	Nothobranchius furzeri	NOTFU09132		A0A1A8A117
			E	Kryptolebias marmoratus	KRYMA19095		A0A3Q3B0L4
			E	Poecilia formosa	POEFO19114		A0A087YJW2
			E	Poecilia reticulata	POERE09922		A0A3P9Q166
			E	Xiphophorus maculatus	XIPMA25396		M4AFN4
			E	Salarias fasciatus	SALFA30543		A0A672FWM4
			E	Astatotilapia calliptera	ASTCA04326		A0A3P8NIN1
			E	Haplochromis burtoni	HAPBU26523		A0A3Q2WYA2
			E	Oreochromis niloticus	ORENI05447		I3IZ90
			E	Amphiprion ocellaris	AMPOC19918		A0A3Q1AYP2
			E	Gadus morhua	GADMO04434		A0A8C4Z0D0
			E	Esox lucius	ESOLU60211		A0A3P8ZXU8
			E	Astyanax mexicanus	ASTMX06848		ENSAMXG00000018740
			E	Pygocentrus nattereri	PYGNA27579		A0A3B4DUK1
			E	Latimeria chalumnae	LATCH10553		H3A9N1

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