Pairwise Orthologs for OCTDE23723

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene OCTDE23723 (ENSODEG00000002779.1)

E Octodon degus

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Branchiostoma floridae	BRAFL18383		A0A9J7LEE4
			E	Scyliorhinus torazame	SCYTO08730		A0A401PE84
			E	Chiloscyllium punctatum	CHIPU11321		A0A401SRB1
			E	Callorhinchus milii	CALMI24613		A0A4W3HWH9
			E	Lepisosteus oculatus	LEPOC12637		W5MR80
			E	Anguilla anguilla	ANGAN28419		XP_035282664
			E	Anabas testudineus	ANATE15236		A0A3Q1IKV5
			E	Seriola dumerili	SERDU16063		A0A3B4VCU7
			E	Echeneis naucrates	ECHNA15080		A0A665U100
			E	Cynoglossus semilaevis	CYNSE29572		A0A3P8UIS0
			E	Scophthalmus maximus	SCOMX30772		A0A8D2ZU02
			E	Dicentrarchus labrax	DICLA45702		A0A8C4HDQ0
			E	Gasterosteus aculeatus	GASAC16270		G3PYR6
			E	Sparus aurata	SPAAU55336		A0A671UUS8
			E	Mola mola	MOLML01716		A0A3Q3VVZ2
			E	Takifugu rubripes	TAKRU17790		H2UI08
			E	Tetraodon nigroviridis	TETNG07098		H3DK23
			E	Oryzias javanicus	ORYJA20346		ENSOJAG00000000130.1
			E	Oryzias latipes	ORYLA00459		ENSORLG00000007341
			E	Oryzias melastigma	ORYME28541		A0A3B3BC65
			E	Nothobranchius furzeri	NOTFU02257		A0A1A8U506
			E	Kryptolebias marmoratus	KRYMA00278		A0A3Q2ZNM5
			E	Cyprinodon variegatus	CYPVA19409		A0A3Q2FDE3
			E	Gambusia affinis	GAMAF15958		ENSGAFG00000017743.1
			E	Poecilia formosa	POEFO11609		A0A087XRN4

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