Pairwise Orthologs for OCTDE01013

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene OCTDE01013 (ENSODEG00000008731.1)

E Octodon degus

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4)	TERSS03502		WP_013570077
			B	Elusimicrobia bacterium Zod_Metabat.862	UC02701691		JXJ19_04770
			E	Branchiostoma floridae	BRAFL42095		A0A9J7HS48
			E	Scyliorhinus torazame	SCYTO02074		A0A401PHQ1
			E	Chiloscyllium punctatum	CHIPU13242		A0A401SWV4
			E	Callorhinchus milii	CALMI18864		A0A4W3IPF7
			E	Lepisosteus oculatus	LEPOC16690		W5NHU9
			E	Anguilla anguilla	ANGAN26230		XP_035280751
			E	Anabas testudineus	ANATE22778		A0A3Q1H6R8
			E	Seriola dumerili	SERDU23015		A0A3B4TL40
			E	Echeneis naucrates	ECHNA54124		A0A665VP03
			E	Cynoglossus semilaevis	CYNSE00712		A0A3P8WPC5
			E	Scophthalmus maximus	SCOMX00104		ENSSMAG00000000519.1
			E	Dicentrarchus labrax	DICLA42621		A0A8C4HUP6
			E	Gasterosteus aculeatus	GASAC15536		G3P445
			E	Sparus aurata	SPAAU43509		A0A671UPW9
			E	Mola mola	MOLML20151		A0A3Q4B2P4
			E	Takifugu rubripes	TAKRU51359		H2S9I3
			E	Tetraodon nigroviridis	TETNG04179		H3D877
			E	Oryzias javanicus	ORYJA32892		ENSOJAG00000018084.1
			E	Oryzias latipes	ORYLA20349		ENSORLG00000019902
			E	Oryzias melastigma	ORYME33188		A0A3B3BN17
			E	Nothobranchius furzeri	NOTFU20495		A0A1A8UTZ2
			E	Kryptolebias marmoratus	KRYMA26171		A0A3Q3AC23
			E	Cyprinodon variegatus	CYPVA05302		A0A3Q2CNC6

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