Pairwise Orthologs for NICAT17689

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene NICAT17689 (A0A1J6KFT0)

E Nicotiana attenuata | Nudix hydrolase 2 [NUDT2_1]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Armatimonadetes bacterium NC_groundwater_1868_Pr3_B-0.1um_69_17	U02AM03516		HZB16_11770
			B	Geobacillus thermodenitrificans (strain NG80-2)	GEOTN02840		GTNG_2903
			B	Lysinibacillus sphaericus (strain C3-41)	LYSSC00557		WP_012292354
			E	Branchiostoma lanceolatum	BRALA33952		BL09048
			E	Bombyx mori	BOMMO07278		BGIBMGA007301-TA
			E	Aedes aegypti	AEDAE14728		Q0IFD5
			E	Bigelowiella natans (strain CCMP2755)	BIGNC09211		JGI_V11_88051
			E	Musa acuminata subsp. malaccensis	MUSAM16221		A0A804KYP1
			E	Tetracentron sinense	TETSI05713		A0A834ZQ13
			E	Kalanchoe fedtschenkoi	KALFE00515		A0A7N0RJI4
			E	Actinidia chinensis var. chinensis	ACTCC12098		A0A2R6PTT3
			E	Solanum lycopersicum	SOLLC22074		A0A3Q7GGW9
			E	Solanum tuberosum	SOLTU28184		M1C429
			E	Phaseolus vulgaris	PHAVU27452		V7B9H8
			E	Phaseolus angularis	PHAAN13937		A0A0L9T750
			E	Rosa chinensis	ROSCH23861		A0A2P6S1B5
			E	Theobroma cacao	THECC21785		A0A061GHU2
			E	Gossypium arboreum	GOSAR01122		LOC108486131
			E	Nymphaea colorata	NYMNZ22402		XP_031492665
			E	Haemonchus contortus	HAECO20786		A0A7I4Z3I7
			E	Haemonchus contortus	HAECO20791		A0A7I4Z4X9
			E	Haemonchus contortus	HAECO20796		A0A7I5EEJ5
			E	Taxus chinensis	TAXCH02515		A0AA38LM96
			E	Taxus chinensis	TAXCH19708		A0AA38LDF8
			E	Nicotiana tabacum	TOBAC60578		A0A1S4AK58

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