Pairwise Orthologs for MOUSE62946

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE62946 (CD3D_MOUSE)

E Mus musculus | T-cell surface glycoprotein CD3 delta chain [Cd3d]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Cynoglossus semilaevis	CYNSE22317		A0A3P8UPQ9
			E	Tachyglossus aculeatus	TACAU13116		XP_038610679
			E	Procavia capensis	PROCA07904		ENSPCAG00000000091
			E	Loxodonta africana	LOXAF06075		G3T784
			E	Echinops telfairi	ECHTE02297		ENSETEG00000001096
			E	Oryctolagus cuniculus	RABIT16016		ENSOCUG00000000438.3
			E	Ochotona princeps	OCHPR06428		ENSOPRG00000016713
			E	Dipodomys ordii	DIPOR02982		ENSDORG00000003434.2
			E	Fukomys damarensis	FUKDA07351		ENSFDAG00000012480.1
			E	Heterocephalus glaber	HETGA04259		A0A0P6J904
			E	Cavia aperea	CAVAP07568		ENSCAPG00000014935.1
			E	Cavia porcellus	CAVPO10131		H0VN41
			E	Chinchilla lanigera	CHILA03425		A0A8C2VUR4
			E	Octodon degus	OCTDE14693		A0A6P3F146
			E	Jaculus jaculus	JACJA19328		A0A8C5L3Y9
			E	Cricetulus griseus	CRIGR26538		A0A3L7HTY4
			E	Rattus norvegicus	RATNO39718		P19377
			E	Nannospalax galili	NANGA09009		A0A8C6REF4
			E	Ictidomys tridecemlineatus	ICTTR09555		ENSSTOG00000024175
			E	Cercocebus atys	CERAT14882		A0A2K5P6C8
			E	Chlorocebus sabaeus	CHLSB01056		A0A0D9S3K4
			E	Macaca fascicularis	MACFA10485		CD3D_MACFA
			E	Macaca mulatta	MACMU10341		F6WI60
			E	Macaca nemestrina	MACNE14846		A0A2K6C604
			E	Mandrillus leucophaeus	MANLE06684		A0A2K5YEB2

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