Pairwise Orthologs for MOUSE60205

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE60205 (G3UZF5)

E Mus musculus | Heat shock transcription factor 4 [Hsf4]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform MOUSE60202.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO08083		A0A401P4M7
			E	Lepisosteus oculatus	LEPOC09367		W5MMT2
			E	Anguilla anguilla	ANGAN19219		XP_035273929
			E	Anabas testudineus	ANATE21713		ENSATEG00000012545.1
			E	Cynoglossus semilaevis	CYNSE24758		A0A3P8X0B7
			E	Scophthalmus maximus	SCOMX01322		ENSSMAG00000013602.1
			E	Dicentrarchus labrax	DICLA43098		XP_051238665
			E	Sparus aurata	SPAAU44136		A0A671VFV3
			E	Mola mola	MOLML18292		A0A3Q4BVH1
			E	Nothobranchius furzeri	NOTFU30225		A0A9D2YTI1
			E	Kryptolebias marmoratus	KRYMA26548		A0A3Q3B2F5
			E	Cyprinodon variegatus	CYPVA27698		A0A3Q2EEW7
			E	Poecilia formosa	POEFO06399		A0A087XFW1
			E	Poecilia reticulata	POERE29259		A0A3P9Q0U8
			E	Xiphophorus maculatus	XIPMA24261		M3ZUS6
			E	Astatotilapia calliptera	ASTCA38929		A0A3P8PSL0
			E	Haplochromis burtoni	HAPBU31725		A0A3Q2WVC5
			E	Oreochromis niloticus	ORENI67434		I3JVD4
			E	Amphiprion ocellaris	AMPOC17951		A0A3Q1CFP4
			E	Amphiprion percula	AMPPE33314		A0A3P8U765
			E	Salmo trutta	SALTR115249		A0A674ASY6
			E	Astyanax mexicanus	ASTMX10887		ENSAMXG00000020456
			E	Pygocentrus nattereri	PYGNA14048		A0A3B4CKG0
			E	Ictalurus punctatus	ICTPU28485		ENSIPUG00000004297.1
			E	Sinocyclocheilus grahami	SINGR05380		A0A672M771

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