Pairwise Orthologs for MOUSE58851

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE58851 (A0A6I8MX21)

E Mus musculus | Predicted gene 10033 [Gm10033]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform MOUSE58853.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Fusarium oxysporum f. sp. cubense (strain race 1)	FUSC103266		N4UV11
			E	Kryptolebias marmoratus	KRYMA22040		A0A3Q2ZIV5
			E	Astyanax mexicanus	ASTMX19422		ENSAMXG00000007811
			E	Oryctolagus cuniculus	RABIT17396		A0A5F9DBX5
			E	Rattus norvegicus	RATNO11562		A0A8I6ABV6
			E	Anas platyrhynchos platyrhynchos	ANAPP01872		A0A493TKC8
			E	Thamnophis elegans	THAEL06484		XP_032067048
			E	Crotalus tigris	CROTI07484		XP_039192475
			E	Ixodes persulcatus	IXOPE23238		HPB47_007976
			E	Centruroides sculpturatus	CENSC21711		XP_023234913
			E	Drosophila navojoa	DRONA00742		A0A484BUM5
			E	Culex quinquefasciatus	CULQU01261		B0X5Y8
			E	Cimex lectularius	CIMLE07734		A0A8I6RM02
			E	Cryptosporidium muris (strain RN66)	CRYMR00646		B6AIM3
			E	Pinus taeda	PINTA07863		PTA00038029
			E	Biomphalaria pfeifferi	BIOPF16607		LOC101852427
			E	Biomphalaria pfeifferi	BIOPF16605		LOC101852200
			B	Emticicia oligotrophica (strain DSM 17448 / CIP 109782 / MTCC 6937 / GPTSA100-15)	EMTOG04168		WP_015031199
			B	Geobacter sulfurreducens (strain DL-1 / KN400)	GEOSK02060		KN400_2157
			B	Myxococcales bacterium SURF_8	U02MY00649		C4523_00985
			B	Deltaproteobacteria bacterium Fred_18-Q3-R57-64_BATAC.308	U10DE02917		IPK13_14885
			B	Nitrospirae bacterium NC_groundwater_1760_Pr3_B-0.1um_42_52	U05NT01612		HZA08_12075
			E	Rhizophagus irregularis (strain DAOM 197198w)	RHIIW15646		A0A015ISX8
			E	Cavia porcellus	CAVPO21910		H0V136
			E	Chinchilla lanigera	CHILA23867		A0A8C2YJ29

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