Pairwise Orthologs for MOUSE58703

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE58703 (MBTP1_MOUSE)

E Mus musculus | Membrane-bound transcription factor site-1 proteas [Mbtps1]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Acanthamoeba castellanii str. Neff	ACACA06292		L8H251
			E	Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500)	POLPP03119		D3BJF1
			E	Cavenderia fasciculata (strain SH3)	CAVFA11678		F4PYN0
			E	Dictyostelium purpureum	DICPU10786		F1A214
			E	Tieghemostelium lacteum	TIELA07896		A0A152A0U8
			E	Thecamonas trahens ATCC 50062	THETB00834		A0A0L0DGQ0
			E	Naegleria gruberi strain NEG-M	NAEGR01581		estExt_Genewise1.C_1
			E	Diacronema lutheri	DIALT13694		A0A8J5XD66
			E	Emiliania huxleyi CCMP1516	EMIHU21440		R1DDY7
			E	Anaeramoeba ignava	ANAIG14517		A0A9Q0L879
			E	Salpingoeca rosetta (strain ATCC 50818 / BSB-021)	SALR507109		F2UDW3
			E	Capsaspora owczarzaki (strain ATCC 30864)	CAPO307202		CAOG_05995
			E	Creolimax fragrantissima	CREFR07351		CFRG7351
			E	Branchiostoma floridae	BRAFL16102		A0A9J7MTF1
			E	Petromyzon marinus	PETMA00519		S4R9F8
			E	Eptatretus burgeri	EPTBU25399		A0A8C4QCE9
			E	Scyliorhinus torazame	SCYTO10778		A0A401PD47
			E	Chiloscyllium punctatum	CHIPU04851		A0A401S803
			E	Callorhinchus milii	CALMI33519		A0A4W3HAY1
			E	Lepisosteus oculatus	LEPOC09288		W5MI11
			E	Anguilla anguilla	ANGAN21170		XP_035275867
			E	Anabas testudineus	ANATE21680		A0A3Q1JH19
			E	Seriola dumerili	SERDU19987		A0A3B4VCB2
			E	Echeneis naucrates	ECHNA53207		A0A665UQV2
			E	Cynoglossus semilaevis	CYNSE24668		A0A3P8W639

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