Pairwise Orthologs for MOUSE58238

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE58238 (FCSK_MOUSE)

E Mus musculus | L-fucose kinase [Fcsk]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Solibacter usitatus (strain Ellin6076)	SOLUE00559		Acid_0569
			B	Abitibacteriaceae bacterium CP_BM_RX_R8_36	UC00304594		JO316_13480
			B	Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR)	SYNGF01463		WP_013624765
			B	Candidatus Latescibacteria bacterium ADurb.Bin168	UC15600218		hddA_1
			B	Candidatus Poribacteria bacterium Bin_402	UC08401859		GF312_12650
			E	Acanthamoeba castellanii str. Neff	ACACA06688		L8H3D3
			E	Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500)	POLPP10622		D3BV41
			E	Cavenderia fasciculata (strain SH3)	CAVFA01318		F4PU15
			E	Dictyostelium discoideum	DICDI01206		Q55DE9
			E	Dictyostelium purpureum	DICPU07490		F0ZSJ1
			E	Tieghemostelium lacteum	TIELA09113		A0A151Z599
			E	Emiliania huxleyi CCMP1516	EMIHU16908		R1BCB7
			E	Monosiga brevicollis	MONBE02430		A9UTS0
			E	Salpingoeca rosetta (strain ATCC 50818 / BSB-021)	SALR501422		F2U0A4
			E	Branchiostoma floridae	BRAFL16408		A0A9J7MUV5
			E	Scyliorhinus torazame	SCYTO13495		A0A401P2J3
			E	Chiloscyllium punctatum	CHIPU13038		A0A401SW80
			E	Callorhinchus milii	CALMI35161		A0A4W3IP23
			E	Lepisosteus oculatus	LEPOC09339		W5MLG7
			E	Anguilla anguilla	ANGAN52823		XP_035252357
			E	Anabas testudineus	ANATE23024		A0A3Q1IAU4
			E	Seriola dumerili	SERDU32113		A0A3B4VF34
			E	Echeneis naucrates	ECHNA54250		A0A665VR66
			E	Cynoglossus semilaevis	CYNSE25010		A0A3P8X4B2
			E	Scophthalmus maximus	SCOMX01531		A0A2U9BXP1

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