Pairwise Orthologs for MOUSE54850

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE54850 (A0A0U1RNN7)

E Mus musculus | EMSY, BRCA2-interacting transcriptional repressor [Emsy]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform MOUSE54844.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Candidatus Roizmanbacteria bacterium Kalu_18-Q3-R12-55_MAXAC.194_uni	UC06100399		IPM65_02100
			E	Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500)	POLPP07925		D3AYD5
			E	Magnaporthiopsis poae (strain ATCC 64411 / 73-15)	MAGP606800		A0A0C4E401
			E	Magnaporthe grisea	MAGGR05399		MGG_11605
			E	Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)	NEUCR01225		Q7S9R1
			E	Yarrowia lipolytica (strain CLIB 122 / E 150)	YARLI01948		Q6CCL1
			E	Spizellomyces punctatus	SPIPN04982		SPPG_05250
			E	Spizellomyces punctatus (strain DAOM BR117)	SPIPD05357		A0A0L0HGC4
			E	Branchiostoma floridae	BRAFL29167		A0A9J7M1U2
			E	Branchiostoma lanceolatum	BRALA13700		BL12701
			E	Scyliorhinus torazame	SCYTO16413		A0A401PVJ5
			E	Chiloscyllium punctatum	CHIPU10923		A0A401SQ89
			E	Lepisosteus oculatus	LEPOC11109		W5MBN7
			E	Anguilla anguilla	ANGAN32271		XP_035290118
			E	Anabas testudineus	ANATE06688		A0A3Q1KEE4
			E	Seriola dumerili	SERDU16933		A0A3B4TZU4
			E	Echeneis naucrates	ECHNA43828		A0A665U867
			E	Cynoglossus semilaevis	CYNSE15357		A0A3P8W7H9
			E	Scophthalmus maximus	SCOMX23320		ENSSMAG00000015001.1
			E	Dicentrarchus labrax	DICLA11293		XP_051257178
			E	Gasterosteus aculeatus	GASAC19161		G3QCF6
			E	Sparus aurata	SPAAU19895		A0A671V9F8
			E	Mola mola	MOLML25746		A0A3Q3WV88
			E	Takifugu rubripes	TAKRU12187		H2U098
			E	Tetraodon nigroviridis	TETNG16034		H3CY43

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