Pairwise Orthologs for MOUSE49250

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE49250 (H3BJ24)

E Mus musculus | Forkhead box P1 [Foxp1]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform MOUSE49257.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Eptatretus burgeri	EPTBU25061		A0A8C4Q8Y6
			E	Scyliorhinus torazame	SCYTO05738		A0A401PCY7
			E	Chiloscyllium punctatum	CHIPU08695		A0A401SIT4
			E	Callorhinchus milii	CALMI18704		A0A4W3HFH5
			E	Lepisosteus oculatus	LEPOC13791		W5MV53
			E	Anguilla anguilla	ANGAN45419		XP_035245307
			E	Anabas testudineus	ANATE02853		A0A3Q1HU27
			E	Seriola dumerili	SERDU07149		A0A3B4UFX1
			E	Echeneis naucrates	ECHNA03707		A0A665UES7
			E	Cynoglossus semilaevis	CYNSE03548		A0A3P8VCA1
			E	Scophthalmus maximus	SCOMX28210		ENSSMAG00000015987.1
			E	Dicentrarchus labrax	DICLA21931		XP_051270081
			E	Gasterosteus aculeatus	GASAC04423		G3PDI6
			E	Sparus aurata	SPAAU41466		A0A671XGS9
			E	Mola mola	MOLML02366		A0A3Q3WN44
			E	Takifugu rubripes	TAKRU21427		A0A674N4V7
			E	Tetraodon nigroviridis	TETNG02720		H3CPI1
			E	Oryzias javanicus	ORYJA02918		ENSOJAG00000013255.1
			E	Oryzias latipes	ORYLA13809		ENSORLG00000003081
			E	Oryzias melastigma	ORYME00388		A0A3B3D1F2
			E	Nothobranchius furzeri	NOTFU17393		foxp1
			E	Kryptolebias marmoratus	KRYMA24314		A0A3Q3FSM3
			E	Cyprinodon variegatus	CYPVA04225		A0A3Q2DEC9
			E	Gambusia affinis	GAMAF30715		ENSGAFG00000008985.1
			E	Poecilia reticulata	POERE27902		A0A3P9MU99

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