Pairwise Orthologs for MOUSE48340

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE48340 (A0A0U1RNN3)

E Mus musculus | Expressed sequence AI854703 [AI854703]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform MOUSE48337.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO06657		A0A401PJV9
			E	Oryzias javanicus	ORYJA16603		ENSOJAG00000001522.1
			E	Kryptolebias marmoratus	KRYMA14408		A0A3Q3BAZ0
			E	Neolamprologus brichardi	NEOBR26046		A0A3Q4GJZ8
			E	Cyprinus carpio carpio	CYPCA66444		A0A9J7XIJ1
			E	Ornithorhynchus anatinus	ORNAN05516		A0A6I8NFA6
			E	Fukomys damarensis	FUKDA22571		A0A091DY59
			E	Heterocephalus glaber	HETGA19503		ENSHGLG00100016082.1
			E	Cavia porcellus	CAVPO13790		A0A286XFE2
			E	Chinchilla lanigera	CHILA19431		A0A8C2YIQ0
			E	Octodon degus	OCTDE06643		A0A6P6E8K8
			E	Jaculus jaculus	JACJA24098		A0A8C5KSZ8
			E	Cricetulus griseus	CRIGR08592		ENSCGRG00000015461.1
			E	Rattus norvegicus	RATNO31391		A0A8I6G1L1
			E	Nannospalax galili	NANGA23312		A0A8C6RMC8
			E	Macaca mulatta	MACMU33078		A0A1D5QJ30
			E	Homo sapiens	HUMAN92003		B7ZLF3
			E	Pan paniscus	PANPA37529		A0A2R9B345
			E	Nomascus leucogenys	NOMLE06395		G1QUI3
			E	Otolemur garnettii	OTOGA10176		H0XHG7
			E	Capra hircus	CAPHI23140		A0A452ECJ8
			E	Sus scrofa	PIGXX13041		A0A4X1UJH3
			E	Manis javanica	MANJA46693		XP_017516582
			E	Dasypus novemcinctus	DASNO12319		ENSDNOG00000031843
			E	Strigops habroptila	STRHB15330		A0A672TUZ4

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