Pairwise Orthologs for MOUSE45084

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE45084 (RIMB2_MOUSE)

E Mus musculus | RIMS-binding protein 2 [Rimbp2]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform MOUSE45089.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Eptatretus burgeri	EPTBU05035		A0A8C4R911
			E	Callorhinchus milii	CALMI38091		A0A4W3J625
			E	Lepisosteus oculatus	LEPOC08206		W5MGR1
			E	Anabas testudineus	ANATE11756		ENSATEG00000019740.1
			E	Seriola dumerili	SERDU06602		A0A3B4VKL3
			E	Echeneis naucrates	ECHNA22494		A0A665WMY2
			E	Cynoglossus semilaevis	CYNSE00541		A0A3P8WEG5
			E	Scophthalmus maximus	SCOMX32328		ENSSMAG00000002869.1
			E	Dicentrarchus labrax	DICLA28609		XP_051277511
			E	Gasterosteus aculeatus	GASAC14635		G3PF14
			E	Sparus aurata	SPAAU12421		A0A671TM81
			E	Mola mola	MOLML26775		A0A3Q3VU55
			E	Tetraodon nigroviridis	TETNG18368		H3C4J5
			E	Oryzias javanicus	ORYJA06905		ENSOJAG00000015873.1
			E	Oryzias latipes	ORYLA17857		ENSORLG00000013723
			E	Gambusia affinis	GAMAF16862		ENSGAFG00000004364.1
			E	Poecilia formosa	POEFO14623		A0A087YGQ1
			E	Poecilia reticulata	POERE33071		A0A3P9MZ71
			E	Xiphophorus maculatus	XIPMA03945		A0A3B5R3S4
			E	Salarias fasciatus	SALFA08238		A0A672JIF1
			E	Astatotilapia calliptera	ASTCA06091		A0A3P8PY13
			E	Neolamprologus brichardi	NEOBR23453		A0A3Q4H576
			E	Amphilophus citrinellus	AMPCI31217		A0A3Q0TAQ3
			E	Amphiprion ocellaris	AMPOC20405		A0A3Q1D2P2
			E	Amphiprion percula	AMPPE05524		A0A3P8SLF6

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