Pairwise Orthologs for MOUSE43299

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE43299 (RHG24_MOUSE)

E Mus musculus | Rho GTPase-activating protein 24 [Arhgap24]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform MOUSE43294.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Acanthamoeba castellanii str. Neff	ACACA13812		L8GGU5
			E	Chiloscyllium punctatum	CHIPU07553		A0A401SFH1
			E	Callorhinchus milii	CALMI21346		A0A4W3HDA2
			E	Lepisosteus oculatus	LEPOC07411		W5N2C6
			E	Anguilla anguilla	ANGAN47581		XP_035248011
			E	Anabas testudineus	ANATE10663		A0A3Q1K178
			E	Seriola dumerili	SERDU27227		A0A3B4UZ95
			E	Echeneis naucrates	ECHNA51907		A0A665WMR5
			E	Cynoglossus semilaevis	CYNSE08687		A0A3P8WYQ1
			E	Scophthalmus maximus	SCOMX09788		A0A8D3A0Q3
			E	Dicentrarchus labrax	DICLA20292		A0A8C4FAY7
			E	Gasterosteus aculeatus	GASAC04701		G3PVM2
			E	Sparus aurata	SPAAU33396		A0A671VEZ4
			E	Mola mola	MOLML06550		A0A3Q3VTE8
			E	Takifugu rubripes	TAKRU43674		H2U6X7
			E	Tetraodon nigroviridis	TETNG10823		H3CQ06
			E	Oryzias javanicus	ORYJA07234		ENSOJAG00000019153.1
			E	Oryzias latipes	ORYLA02542		ENSORLG00000006238
			E	Oryzias melastigma	ORYME18841		A0A3B3D806
			E	Nothobranchius furzeri	NOTFU03412		A0A1A8A2T9
			E	Kryptolebias marmoratus	KRYMA04573		A0A3Q3B3L1
			E	Cyprinodon variegatus	CYPVA08495		A0A3Q2D5P5
			E	Gambusia affinis	GAMAF03323		ENSGAFG00000012134.1
			E	Poecilia formosa	POEFO09542		A0A087XK30
			E	Poecilia reticulata	POERE05475		A0A3P9Q162

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