Pairwise Orthologs for MOUSE42243

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE42243 (A6PW90)

E Mus musculus | 4732496O08Rik protein | PRAME like 12 [Pramel12]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform MOUSE42241.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Cricetulus griseus	CRIGR26082		G3IKK8
			E	Rattus norvegicus	RATNO32760		D4A3H1
			E	Chlorocebus sabaeus	CHLSB09363		A0A0D9S8J6
			E	Papio anubis	PAPAN20709		A0A096MZ10
			E	Gorilla gorilla gorilla	GORGO19883		G3RVR5
			E	Homo sapiens	HUMAN47593		PRA20_HUMAN
			E	Mustela putorius furo	MUSPF18581		M3YY44
			E	Nannospalax galili	NANGA24161		A0A8C6REU4
			E	Nannospalax galili	NANGA00003		A0A8C6QYJ3
			E	Mandrillus leucophaeus	MANLE13019		A0A2K5YVF4
			E	Mandrillus leucophaeus	MANLE13014		A0A2K5Y078
			E	Mandrillus leucophaeus	MANLE13018		A0A2K5ZW37
			E	Oryctolagus cuniculus	RABIT15267		ENSOCUG00000008348.4
			E	Cavia porcellus	CAVPO08004		A0A286XLP9
			E	Rhinopithecus bieti	RHIBE14034		A0A2K6M7E2
			E	Otolemur garnettii	OTOGA00517		H0XT89
			E	Tursiops truncatus	TURTR04781		ENSTTRG00000013749
			E	Tegillarca granosa	TEGGR00934		KUTeg_003446
			E	Exaiptasia diaphana	EXADI10681		A0A913Y9S8
			E	Loxodonta africana	LOXAF00219		G3TRP3
			E	Loxodonta africana	LOXAF00220		G3TP14
			E	Loxodonta africana	LOXAF01610		G3TYU3
			E	Loxodonta africana	LOXAF18011		G3UF09
			E	Loxodonta africana	LOXAF18012		G3TVA9
			E	Echinops telfairi	ECHTE00367		ENSETEG00000004260

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