Pairwise Orthologs for MOUSE39997

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE39997 (A1AG1_MOUSE)

E Mus musculus | Alpha-1-acid glycoprotein 1 [Orm1]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Haliaeetus leucocephalus	HALLE12709		XP_010569434
			E	Procavia capensis	PROCA00204	m:1	ENSPCAG00000000006
			E	Echinops telfairi	ECHTE01326	m:1	ENSETEG00000014783
			E	Oryctolagus cuniculus	RABIT14042	m:1	A1AG_RABIT
			E	Ochotona princeps	OCHPR15820	m:1	ENSOPRG00000005699
			E	Dipodomys ordii	DIPOR15169	m:1	ENSDORG00000008193.2
			E	Fukomys damarensis	FUKDA03823	m:1	ENSFDAG00000019985.1
			E	Cricetulus griseus	CRIGR11379	m:1	ENSCGRG00000008651.1
			E	Rattus norvegicus	RATNO34133	m:1	A0A0H2UHF8
			E	Nannospalax galili	NANGA02186	m:1	A0A8C6W7Q0
			E	Ictidomys tridecemlineatus	ICTTR18026	m:1	ENSSTOG00000012755
			E	Cercocebus atys	CERAT22828	m:1	A0A2K5LTG7
			E	Chlorocebus sabaeus	CHLSB03104	m:1	A0A0D9RKG7
			E	Macaca fascicularis	MACFA11410	m:1	ENSMFAG00000038844.1
			E	Macaca mulatta	MACMU12143	m:1	F7H7G9
			E	Macaca nemestrina	MACNE32586	m:1	A0A2K6D9J1
			E	Mandrillus leucophaeus	MANLE27158	m:1	A0A2K5YKN9
			E	Papio anubis	PAPAN08618	m:1	A0A096P0S9
			E	Colobus angolensis palliatus	COLAP27477	m:1	A0A2K5JM43
			E	Rhinopithecus bieti	RHIBE17502	m:1	A0A2K6KSA8

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