Pairwise Orthologs for MOUSE37261

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE37261 (RPRD2_MOUSE)

E Mus musculus | Regulation of nuclear pre-mRNA domain-containing p [Rprd2]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Dactylellina haptotyla (strain CBS 200.50)	DACHA08146		S8B9Z0
			E	Pyronema omphalodes (strain CBS 100304)	PYROM05593		U4LSI9
			E	Dothistroma septosporum (strain NZE10 / CBS 128990)	DOTSN11245		M2WKZ1
			E	Glarea lozoyensis (strain ATCC 20868 / MF5171)	GLAL200396		S3DRE8
			E	Cordyceps militaris (strain CM01)	CORMM08410		G3JR92
			E	Fusarium vanettenii (strain ATCC MYA-4622 / CBS 123669 / FGSC 9596 / NRRL 45880 / 77-13-4)	FUSV713177		C7YTB4
			E	Nectria haematococca	NECHA10540		fgenesh1_pg.sca_5_ch
			E	Purpureocillium lilacinum	PURLI09772		A0A179GSZ0
			E	Ophiostoma piceae (strain UAMH 11346)	OPHP106212		S3BW28
			E	Thermothelomyces thermophilus	THETO02781		Spoth1.estExt_Genewi
			E	Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799)	MYCTT00503		G2QAF5
			E	Grifola frondosa	GRIFR03305		A0A1C7MJ61
			E	Pycnoporus cinnabarinus	PYCCI00952		A0A060SG46
			E	Trametes pubescens	TRAPU01348		A0A1M2VYT9
			E	Spizellomyces punctatus	SPIPN01330		SPPG_01390
			E	Spizellomyces punctatus (strain DAOM BR117)	SPIPD01061		A0A0L0HSQ3
			E	Chiloscyllium punctatum	CHIPU20054		A0A401RUC2
			E	Latimeria chalumnae	LATCH06992		H3AN59
			E	Tachyglossus aculeatus	TACAU27151		XP_038624788
			E	Procavia capensis	PROCA06054		ENSPCAG00000016555
			E	Loxodonta africana	LOXAF15202		G3SVA5
			E	Echinops telfairi	ECHTE13342		ENSETEG00000008562
			E	Oryctolagus cuniculus	RABIT03456		ENSOCUG00000011770.3
			E	Ochotona princeps	OCHPR13731		ENSOPRG00000010157
			E	Dipodomys ordii	DIPOR09104		ENSDORG00000023813.1

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