Pairwise Orthologs for MOUSE33298

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE33298 (RHG40_MOUSE)

E Mus musculus | Rho GTPase-activating protein 40 [Arhgap40]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform MOUSE33299.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO04915		A0A401P009
			E	Chiloscyllium punctatum	CHIPU03700		A0A401S4P6
			E	Lepisosteus oculatus	LEPOC06272		W5MH55
			E	Anguilla anguilla	ANGAN43766		XP_035243109
			E	Anabas testudineus	ANATE03873		A0A3Q1JMQ6
			E	Seriola dumerili	SERDU22012		A0A3B4V8T4
			E	Echeneis naucrates	ECHNA02906		A0A665T5Z2
			E	Cynoglossus semilaevis	CYNSE04105		A0A3P8WUD2
			E	Scophthalmus maximus	SCOMX27158		ENSSMAG00000011867.1
			E	Dicentrarchus labrax	DICLA23507		A0A8P4G0Z1
			E	Gasterosteus aculeatus	GASAC04019		G3NSY5
			E	Sparus aurata	SPAAU41573		A0A671XJD8
			E	Mola mola	MOLML02628		A0A3Q3W5T6
			E	Takifugu rubripes	TAKRU21986		H2UB77
			E	Tetraodon nigroviridis	TETNG02189		H3CNL8
			E	Oryzias javanicus	ORYJA03851		ENSOJAG00000019799.1
			E	Oryzias latipes	ORYLA13944		ENSORLG00000005618
			E	Oryzias melastigma	ORYME00685		ENSOMEG00000017918.1
			E	Nothobranchius furzeri	NOTFU16757		A0A8C6PRT3
			E	Kryptolebias marmoratus	KRYMA05246		A0A3Q3AM47
			E	Cyprinodon variegatus	CYPVA02972		A0A3Q2GFH2
			E	Gambusia affinis	GAMAF00858		ENSGAFG00000013980.1
			E	Poecilia formosa	POEFO00402		A0A087XGI9
			E	Poecilia reticulata	POERE26755		A0A3P9NTH9
			E	Xiphophorus maculatus	XIPMA18050		A0A3B5QCL9

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