Pairwise Orthologs for MOUSE29341

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE29341 (IN80D_MOUSE)

E Mus musculus | INO80 complex subunit D [Ino80d]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform MOUSE29345.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Branchiostoma floridae	BRAFL35924		A0A9J7HI13
			E	Scyliorhinus torazame	SCYTO06696		A0A401PK20
			E	Chiloscyllium punctatum	CHIPU08714		A0A401SJ10
			E	Callorhinchus milii	CALMI26000		A0A4W3II62
			E	Lepisosteus oculatus	LEPOC03378		W5MY44
			E	Anabas testudineus	ANATE24076		A0A3Q1IHX6
			E	Seriola dumerili	SERDU02861		A0A3B4T556
			E	Echeneis naucrates	ECHNA13835		A0A665X744
			E	Cynoglossus semilaevis	CYNSE10542		A0A3P8US20
			E	Scophthalmus maximus	SCOMX06939		A0A2U9C9L1
			E	Dicentrarchus labrax	DICLA12708		A0A8P4KPM5
			E	Gasterosteus aculeatus	GASAC10742		G3NK26
			E	Sparus aurata	SPAAU28874		A0A671XKC2
			E	Mola mola	MOLML04979		A0A3Q3XPC7
			E	Takifugu rubripes	TAKRU24156		A0A674P0A5
			E	Tetraodon nigroviridis	TETNG08524		H3D900
			E	Oryzias javanicus	ORYJA41473		ENSOJAG00000022689.1
			E	Oryzias latipes	ORYLA09909		ENSORLG00000017623
			E	Oryzias melastigma	ORYME13547		A0A3B3BG64
			E	Nothobranchius furzeri	NOTFU22632		A0A1A7ZMH9
			E	Kryptolebias marmoratus	KRYMA14990		A0A3Q3AZU1
			E	Cyprinodon variegatus	CYPVA03825		A0A3Q2CA78
			E	Gambusia affinis	GAMAF05569		ENSGAFG00000004688.1
			E	Poecilia formosa	POEFO03190		A0A087YBU2
			E	Poecilia reticulata	POERE22894		A0A3P9NGT7

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