Pairwise Orthologs for MOUSE28146

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE28146 (A0A087WPL3)

E Mus musculus | Ral GEF with PH domain and SH3 binding motif 2 [Ralgps2]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform MOUSE28141.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Chiloscyllium punctatum	CHIPU08813		A0A401SJ55
			E	Callorhinchus milii	CALMI30684		A0A4W3GZ09
			E	Lepisosteus oculatus	LEPOC01743		W5MWY3
			E	Anguilla anguilla	ANGAN17640		XP_035270597
			E	Anabas testudineus	ANATE16880		A0A3Q1IVP9
			E	Seriola dumerili	SERDU18627		A0A3B4T5J0
			E	Echeneis naucrates	ECHNA36038		A0A665USH6
			E	Cynoglossus semilaevis	CYNSE21041		A0A3P8V906
			E	Scophthalmus maximus	SCOMX04643		ENSSMAG00000017711.1
			E	Dicentrarchus labrax	DICLA37757		A0A8P4KLW4
			E	Gasterosteus aculeatus	GASAC12981		G3PNR3
			E	Sparus aurata	SPAAU68086		A0A671V604
			E	Mola mola	MOLML04012		A0A3Q3VMF8
			E	Takifugu rubripes	TAKRU26735		H2VDH0
			E	Tetraodon nigroviridis	TETNG00645		H3CZU8
			E	Oryzias javanicus	ORYJA23352		ENSOJAG00000004865.1
			E	Oryzias latipes	ORYLA13451		ENSORLG00000014603
			E	Oryzias melastigma	ORYME15493		A0A3B3B6Y1
			E	Nothobranchius furzeri	NOTFU26904		A0A1A8URX0
			E	Kryptolebias marmoratus	KRYMA04395		A0A3Q3A533
			E	Cyprinodon variegatus	CYPVA21565		A0A3Q2EI25
			E	Gambusia affinis	GAMAF12916		ENSGAFG00000006523.1
			E	Poecilia formosa	POEFO04951		A0A087Y8R6
			E	Poecilia reticulata	POERE25739		A0A3P9N0W8
			E	Xiphophorus maculatus	XIPMA35086		M4AAG7

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