Pairwise Orthologs for MOUSE27362

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE27362 (NCF2_MOUSE)

E Mus musculus | Neutrophil cytosol factor 2 [Ncf2]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform MOUSE27360.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Mucor circinelloides f. circinelloides (strain 1006PhL)	MUCC107016		S2JUY9
			E	Chiloscyllium punctatum	CHIPU09354		A0A401SKQ8
			E	Lepisosteus oculatus	LEPOC01256		W5M1P5
			E	Anguilla anguilla	ANGAN15955		A0A9D3S3E0
			E	Anabas testudineus	ANATE01887		ENSATEG00000022758.1
			E	Seriola dumerili	SERDU16191		A0A3B4TNS9
			E	Echeneis naucrates	ECHNA38703		A0A665WST2
			E	Cynoglossus semilaevis	CYNSE21485		A0A3P8W273
			E	Scophthalmus maximus	SCOMX18565		ENSSMAG00000001354.1
			E	Dicentrarchus labrax	DICLA18520		A0A8P4G3D0
			E	Gasterosteus aculeatus	GASAC02561		G3NB59
			E	Sparus aurata	SPAAU46165		A0A671TWA2
			E	Mola mola	MOLML00221		A0A3Q3WE20
			E	Tetraodon nigroviridis	TETNG19366		H3CTM1
			E	Oryzias javanicus	ORYJA26005		ENSOJAG00000021337.1
			E	Oryzias latipes	ORYLA08943		ENSORLG00000005388
			E	Oryzias melastigma	ORYME19670		A0A3B3CFC4
			E	Nothobranchius furzeri	NOTFU13223		A0A1A7ZMB4
			E	Kryptolebias marmoratus	KRYMA09754		A0A3Q2ZN50
			E	Cyprinodon variegatus	CYPVA07371		A0A3Q2CEY6
			E	Gambusia affinis	GAMAF26040		ENSGAFG00000019683.1
			E	Poecilia formosa	POEFO13571		A0A087Y191
			E	Poecilia reticulata	POERE17214		A0A3P9NVF4
			E	Xiphophorus maculatus	XIPMA19789		A0A3B5R989
			E	Salarias fasciatus	SALFA02946		A0A672GKA1

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