Pairwise Orthologs for MOUSE26569

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE26569 (PCSK5_MOUSE)

E Mus musculus | Proprotein convertase subtilisin/kexin type 5 [Pcsk5]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform MOUSE26568.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Ignavibacteria bacterium Vibo_18-Q3-R45-57_BATAC.435	UC05500790		IPP94_04115
			B	Myxococcales bacterium AS27yjCOA_137	U04MY02060		GYA21_04815
			B	Myxococcales bacterium SURF_8	U02MY01041		C4523_09145
			E	Entamoeba histolytica	ENTHI01010		rna_EHI_050650-1
			E	Entamoeba histolytica (strain ATCC 30459 / HM-1:IMSS / ABRM)	ENTH100618		C4LTT5
			E	Salpingoeca rosetta (strain ATCC 50818 / BSB-021)	SALR500421		F2TWG3
			E	Branchiostoma floridae	BRAFL04886		A0A9J7MDV2
			E	Branchiostoma lanceolatum	BRALA15028		BL15350
			E	Chiloscyllium punctatum	CHIPU18172		A0A401RME8
			E	Callorhinchus milii	CALMI24918		A0A4W3IP67
			E	Lepisosteus oculatus	LEPOC07195		W5MUD3
			E	Anguilla anguilla	ANGAN37706		XP_035235411
			E	Dicentrarchus labrax	DICLA29339		XP_051278440
			E	Gasterosteus aculeatus	GASAC14291		G3NZ67
			E	Takifugu rubripes	TAKRU30880		A0A674NA07
			E	Tetraodon nigroviridis	TETNG03172		H3D124
			E	Oryzias javanicus	ORYJA43270		A0A3S2MJ27
			E	Kryptolebias marmoratus	KRYMA08896		A0A3Q3BAU5
			E	Xiphophorus maculatus	XIPMA04588		M4ASR1
			E	Salarias fasciatus	SALFA06110		A0A672HAL6
			E	Astatotilapia calliptera	ASTCA05516		A0A3P8QWC6
			E	Oreochromis aureus	OREAU11303		A0A668VWQ7
			E	Oreochromis niloticus	ORENI11418		I3K682
			E	Gadus morhua	GADMO10069		A0A8C5B4C3
			E	Esox lucius	ESOLU37276		A0A3P8ZEC0

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