Pairwise Orthologs for MOUSE24252

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE24252 (A0A0G2JDC8)

E Mus musculus | Synuclein, alpha interacting protein (synphilin) [Sncaip]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform MOUSE24250.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO04872		A0A401NZF0
			E	Chiloscyllium punctatum	CHIPU02915		A0A401S297
			E	Callorhinchus milii	CALMI24812		A0A4W3J5F0
			E	Lepisosteus oculatus	LEPOC07108		W5MQG8
			E	Anguilla anguilla	ANGAN37869		XP_035235727
			E	Anabas testudineus	ANATE12911		A0A3Q1I4U5
			E	Seriola dumerili	SERDU31599		A0A3B4UWS3
			E	Echeneis naucrates	ECHNA21601		A0A665VIG3
			E	Cynoglossus semilaevis	CYNSE32391		A0A3P8VL88
			E	Scophthalmus maximus	SCOMX33580		ENSSMAG00000017013.1
			E	Dicentrarchus labrax	DICLA30313		A0A8P4GMN7
			E	Sparus aurata	SPAAU13278		A0A671UNM1
			E	Takifugu rubripes	TAKRU30887		H2U0U3
			E	Tetraodon nigroviridis	TETNG03351		H3DH62
			E	Oryzias latipes	ORYLA18065		ENSORLG00000017129
			E	Oryzias melastigma	ORYME15363		A0A3B3BD55
			E	Nothobranchius furzeri	NOTFU17748		A0A1A8A6E7
			E	Kryptolebias marmoratus	KRYMA22296		A0A3Q3ACT3
			E	Cyprinodon variegatus	CYPVA07046		A0A3Q2DAE9
			E	Gambusia affinis	GAMAF26352		ENSGAFG00000015950.1
			E	Poecilia formosa	POEFO18040		A0A087X3Y6
			E	Poecilia reticulata	POERE34319		A0A3P9Q0L9
			E	Xiphophorus maculatus	XIPMA04843		M4ALD8
			E	Astatotilapia calliptera	ASTCA06372		A0A3P8R3G2
			E	Haplochromis burtoni	HAPBU21792		A0A3Q2WL63

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