Pairwise Orthologs for MOUSE21482

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE21482 (AFAD_MOUSE)

E Mus musculus | Afadin [Afdn]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform MOUSE21479.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Eptatretus burgeri	EPTBU21076		A0A8C4QSF1
			E	Chiloscyllium punctatum	CHIPU08672		A0A401SIR9
			E	Callorhinchus milii	CALMI17571		A0A4W3HU73
			E	Lepisosteus oculatus	LEPOC00404		W5NFI2
			E	Anguilla anguilla	ANGAN24600		XP_035278949
			E	Anabas testudineus	ANATE31861		ENSATEG00000021867.1
			E	Seriola dumerili	SERDU01377		A0A3B4TJ94
			E	Echeneis naucrates	ECHNA30814		A0A665V5J7
			E	Cynoglossus semilaevis	CYNSE26803		A0A3P8UWN7
			E	Scophthalmus maximus	SCOMX17914		ENSSMAG00000004535.1
			E	Dicentrarchus labrax	DICLA17900		XP_051265687
			E	Sparus aurata	SPAAU61432		A0A671V565
			E	Mola mola	MOLML13501		A0A3Q3X4E7
			E	Tetraodon nigroviridis	TETNG04397		H3DP88
			E	Oryzias melastigma	ORYME32394		A0A3B3B7G7
			E	Nothobranchius furzeri	NOTFU07201		A0A9D2Z2P3
			E	Kryptolebias marmoratus	KRYMA21174		A0A3Q3GI56
			E	Cyprinodon variegatus	CYPVA05773		A0A3Q2D5P4
			E	Gambusia affinis	GAMAF01883		ENSGAFG00000005786.1
			E	Poecilia formosa	POEFO18141		A0A096M6N6
			E	Poecilia reticulata	POERE18334		A0A3P9PWS5
			E	Xiphophorus maculatus	XIPMA07964		M3ZTT3
			E	Salarias fasciatus	SALFA03980		A0A672F751
			E	Astatotilapia calliptera	ASTCA10908		A0A3P8NA88
			E	Haplochromis burtoni	HAPBU15153		A0A3Q2X491

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