Pairwise Orthologs for MOUSE16417

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE16417 (K3W4Q5)

E Mus musculus | Family with sequence similarity 186, member A [Fam186a]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Burkholderia gladioli (strain BSR3)	BURGS04354		bgla_2g06170
			E	Echeneis naucrates	ECHNA00533		A0A665TQQ9
			E	Sparus aurata	SPAAU47820		A0A671YAC9
			E	Gambusia affinis	GAMAF18162		ENSGAFG00000010817.1
			E	Salmo trutta	SALTR75633		A0A674CZ32
			E	Fukomys damarensis	FUKDA18450		A0A091DT79
			E	Ictidomys tridecemlineatus	ICTTR08402		ENSSTOG00000026184
			E	Cercocebus atys	CERAT25132		A0A2K5KV75
			E	Macaca fascicularis	MACFA03108		ENSMFAG00000031313.1
			E	Macaca mulatta	MACMU05303		A0A1D5QHU8
			E	Macaca nemestrina	MACNE43327		A0A2K6AP47
			E	Mandrillus leucophaeus	MANLE15671		A0A2K5ZJC4
			E	Rhinopithecus bieti	RHIBE35399		A0A2K6KU06
			E	Gorilla gorilla gorilla	GORGO06748		G3RK75
			E	Homo sapiens	HUMAN12636		F186A_HUMAN
			E	Pan paniscus	PANPA09426		A0A2R9BS19
			E	Cebus imitator	CEBIM21563		A0A2K5RDU1
			E	Saimiri boliviensis boliviensis	SAIBB31253		A0A2K6SIV8
			E	Carlito syrichta	CARSF29068		ENSTSYG00000033743.1
			E	Propithecus coquereli	PROCO09252		A0A2K6FQI4
			E	Ovis aries	SHEEP14326		W5Q8P4
			E	Sus scrofa	PIGXX25309		ENSSSCG00000026061.2
			E	Vulpes vulpes	VULVU13942		ENSVVUG00000024679.1
			E	Ailuropoda melanoleuca	AILME09604		ENSAMEG00000001271
			E	Ursus americanus	URSAM19613		A0A452REZ3

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