Pairwise Orthologs for MOUSE14116

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE14116 (A0A2I3BPL3)

E Mus musculus | Mitogen-activated protein kinase 8 | Stress-activated protein kinase JNK [Mapk8]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Streptomyces pratensis (strain ATCC 33331 / IAF-45CD)	STRFA03720		Sfla_3796
			E	Ogataea parapolymorpha (strain ATCC 26012 / BCRC 20466 / JCM 22074 / NRRL Y-7560 / DL-1)	OGAPD03490		W1QGW8
			E	Branchiostoma lanceolatum	BRALA04011		BL14252
			E	Scyliorhinus torazame	SCYTO01399		A0A401PCV2
			E	Chiloscyllium punctatum	CHIPU06965		A0A401SE05
			E	Callorhinchus milii	CALMI33219		A0A4W3GU13
			E	Anabas testudineus	ANATE32376		ENSATEG00000005885.1
			E	Seriola dumerili	SERDU05254		A0A3B4TS23
			E	Cynoglossus semilaevis	CYNSE28067		A0A3P8WYS2
			E	Scophthalmus maximus	SCOMX12060		ENSSMAG00000005641.1
			E	Dicentrarchus labrax	DICLA24553		XP_051273410
			E	Gasterosteus aculeatus	GASAC03379		G3NQF0
			E	Sparus aurata	SPAAU32178		A0A671YDI0
			E	Mola mola	MOLML12708		A0A3Q3W0A5
			E	Oryzias javanicus	ORYJA10045		ENSOJAG00000003171.1
			E	Oryzias latipes	ORYLA07721		ENSORLG00000002370
			E	Oryzias melastigma	ORYME23903		A0A3B3DCD0
			E	Nothobranchius furzeri	NOTFU20326		A0A9D3BE15
			E	Cyprinodon variegatus	CYPVA27540		A0A3Q2DR94
			E	Gambusia affinis	GAMAF26508		ENSGAFG00000007976.1
			E	Poecilia formosa	POEFO01065		A0A087YI69
			E	Poecilia reticulata	POERE15180		A0A3P9QC35
			E	Salarias fasciatus	SALFA42444		A0A672IRN9
			E	Astatotilapia calliptera	ASTCA39977		A0A3P8QA39
			E	Haplochromis burtoni	HAPBU21308		A0A3Q2USI2

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