Pairwise Orthologs for MOUSE11811

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE11811 (ACTN2_MOUSE)

E Mus musculus | Alpha-actinin-2 [Actn2]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Coniosporium apollinis (strain CBS 100218)	CONA105846		R7YXM3
			E	Aureobasidium pullulans	AURPU06205		fgenesh1_kg.12_#_139
			E	Aureobasidium subglaciale (strain EXF-2481)	AURSE06329		A0A074Z746
			E	Zymoseptoria tritici	ZYMTR09851		EGP84957
			E	Zymoseptoria tritici (strain CBS 115943 / IPO323)	ZYMTI02058		F9XH71
			E	Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1)	SCLS100264		A7E4P4
			E	Cordyceps confragosa	CORDF06362		A0A179IFF2
			E	Beauveria bassiana	BEABA03800		A0A2N6NPK8
			E	Cryphonectria parasitica	CRYPA02082		fgenesh1_pm.1_#_828
			E	Rosellinia necatrix	ROSNE06515		A0A1W2TH73
			E	Trametes versicolor (strain FP-101664)	TRAVS05803		XP_008037774
			E	Spizellomyces punctatus	SPIPN06008		SPPG_06332
			E	Spizellomyces punctatus (strain DAOM BR117)	SPIPD06662		A0A0L0HAR8
			E	Phycomyces blakesleeanus	PHYBL00714		estExt_Genewise1.C_1
			E	Scyliorhinus torazame	SCYTO17400		A0A401PX77
			E	Chiloscyllium punctatum	CHIPU01091		A0A401RX23
			E	Callorhinchus milii	CALMI16615		A0A4W3IPS8
			E	Lepisosteus oculatus	LEPOC05355		W5NIS0
			E	Anguilla anguilla	ANGAN06010		XP_035260868
			E	Anabas testudineus	ANATE09718		ENSATEG00000009199.1
			E	Seriola dumerili	SERDU15308		A0A3B4UX80
			E	Echeneis naucrates	ECHNA10674		A0A665VBU0
			E	Cynoglossus semilaevis	CYNSE04782		A0A3P8UWX6
			E	Scophthalmus maximus	SCOMX07814		ENSSMAG00000019211.1
			E	Dicentrarchus labrax	DICLA03436		XP_051233579

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