Pairwise Orthologs for MOUSE10006

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE10006 (A0A0R4J1L3)

E Mus musculus | Zinc finger with KRAB and SCAN domains 3 [Zkscan3]

‹

Loading, please wait...

Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Neolamprologus brichardi	NEOBR19306		A0A3Q4MKC2
			E	Procavia capensis	PROCA00370		ENSPCAG00000011654
			E	Dipodomys ordii	DIPOR20987		A0A1S3GCX6
			E	Fukomys damarensis	FUKDA17867		ENSFDAG00000005159.1
			E	Jaculus jaculus	JACJA22922		A0A8C5JZC8
			E	Cricetulus griseus	CRIGR14315		G3HPX5
			E	Rattus norvegicus	RATNO12336		A6KN76
			E	Nannospalax galili	NANGA25241		A0A8C6R4Z1
			E	Gorilla gorilla gorilla	GORGO37101		G3R228
			E	Homo sapiens	HUMAN83567		ZKSC3_HUMAN
			E	Pongo abelii	PONAB30569		A0A6D2XJ53
			E	Nomascus leucogenys	NOMLE18523		G1QX65
			E	Microcebus murinus	MICMU09468		ENSMICG00000010491
			E	Propithecus coquereli	PROCO31457		A0A2K6EYK3
			E	Dasypus novemcinctus	DASNO13268		ENSDNOG00000033262
			E	Varanus komodoensis	VARKO21779		A0A8D2J1L5
			E	Python bivittatus	PYTBI22657		A0A9F5J6P5
			E	Ciona intestinalis	CIOIN14514		F6ZJ76
			E	Drosophila suzukii	DROSZ19410		XP_016942414
			E	Acyrthosiphon pisum	ACYPI29622		ACYPI000860
			E	Echeneis naucrates	ECHNA18853		A0A665TZC8
			E	Astyanax mexicanus	ASTMX00442		A0A8T2MHQ3
			E	Pygocentrus nattereri	PYGNA28491		A0A3B4DI98
			E	Ictalurus punctatus	ICTPU06462		A0A2D0SFS4
			E	Ochotona princeps	OCHPR06844		ENSOPRG00000003069

Showing 1 to 25 of 25 rows rows per page