Pairwise Orthologs for MOUSE09043

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE09043 (Q9D1E1)

E Mus musculus | ISG12a protein [Ifi27]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Capsaspora owczarzaki (strain ATCC 30864)	CAPO301018		A0A0D2VI21
			E	Heterocephalus glaber	HETGA06081	1:n	ENSHGLG00100016882.1
			E	Cavia porcellus	CAVPO23127	1:1	A0A286XIT5
			E	Rattus norvegicus	RATNO36501	1:1	A0A8I5ZTN9
			E	Ictidomys tridecemlineatus	ICTTR10328	1:1	I3M494
			E	Capra hircus	CAPHI13959		A0A452EBC3
			E	Ovis aries	SHEEP08004		W5PYD2
			E	Sus scrofa	PIGXX33051		Q6IEA3
			E	Mustela putorius furo	MUSPF12578		M3XVZ3
			E	Equus asinus asinus	EQUAS06258		A0A8C4MTN6
			E	Equus caballus	HORSE23169		ENSECAG00000017172.3
			E	Manis javanica	MANJA36317		XP_036847663
			E	Dipodomys ordii	DIPOR01633	1:1	ENSDORG00000003637.2
			E	Heterocephalus glaber	HETGA06079	1:n	ENSHGLG00100014801.1
			E	Chinchilla lanigera	CHILA10630	1:1	A0A8C2VX95
			E	Bos taurus	BOVIN16925		Q6IED4

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