Pairwise Orthologs for MOUSE05810

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE05810 (SYNRG_MOUSE)

E Mus musculus | Synergin gamma [Synrg]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform MOUSE05813.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Salpingoeca rosetta (strain ATCC 50818 / BSB-021)	SALR500494		F2TWN6
			E	Pyrenophora tritici-repentis (strain Pt-1C-BFP)	PYRTR03731		B2W2T3
			E	Petromyzon marinus	PETMA05517		S4RJW5
			E	Scyliorhinus torazame	SCYTO05312		A0A401P6T7
			E	Chiloscyllium punctatum	CHIPU03002		A0A401S2J8
			E	Callorhinchus milii	CALMI27129		A0A4W3IN67
			E	Lepisosteus oculatus	LEPOC08926		W5MFH9
			E	Anguilla anguilla	ANGAN33412		XP_035289993
			E	Anabas testudineus	ANATE19538		A0A3Q1JQB2
			E	Seriola dumerili	SERDU23953		A0A3B4UAU6
			E	Echeneis naucrates	ECHNA05897		A0A665T4Y7
			E	Cynoglossus semilaevis	CYNSE23092		A0A3P8WAC0
			E	Scophthalmus maximus	SCOMX22068		ENSSMAG00000004139.1
			E	Dicentrarchus labrax	DICLA07993		A0A8C4ICX8
			E	Gasterosteus aculeatus	GASAC19829		G3PAS3
			E	Sparus aurata	SPAAU15933		A0A671TKL9
			E	Mola mola	MOLML07595		A0A3Q3WUF5
			E	Takifugu rubripes	TAKRU02887		H2SDQ0
			E	Tetraodon nigroviridis	TETNG05690		H3DFM5
			E	Oryzias javanicus	ORYJA09561		A0A437CQL0
			E	Oryzias latipes	ORYLA03244		ENSORLG00000004525
			E	Oryzias melastigma	ORYME07198		A0A3B3BD78
			E	Nothobranchius furzeri	NOTFU09961		A0A8C6KNV1
			E	Kryptolebias marmoratus	KRYMA23944		A0A3Q3GSC4
			E	Cyprinodon variegatus	CYPVA01451		A0A3Q2DAE8

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