Pairwise Orthologs for MOUSE05361

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE05361 (CCL2_MOUSE)

E Mus musculus | C-C motif chemokine 2 [Ccl2]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Salmo salar	SALSA13545		A0A1S3PWJ4
			E	Danio rerio	DANRE26803		ENSDARG00000098460.2
			E	Cricetulus griseus	CRIGR01154		G3GTT2
			E	Rattus norvegicus	RATNO02716		CCL2_RAT
			E	Ictidomys tridecemlineatus	ICTTR11069		I3NCV7
			E	Salmo trutta	SALTR76548		A0A673W0D9
			E	Salmo trutta	SALTR82620		A0A674C2R0
			E	Salmo trutta	SALTR82623		A0A674C249
			E	Chinchilla lanigera	CHILA18320		A0A8C2V3C9
			E	Chinchilla lanigera	CHILA18321		A0A8C2V237
			E	Cyprinus carpio carpio	CYPCA139574		A0A9J8AUA0
			E	Microcebus murinus	MICMU13380		ENSMICG00000004830
			E	Myotis lucifugus	MYOLU14014		G1PI38
			E	Cebus imitator	CEBIM09006		A0A2K5QZZ3
			E	Cebus imitator	CEBIM09021		A0A2K5R8X9
			E	Cebus imitator	CEBIM08913		A0A2K5PJT1
			E	Pteropus vampyrus	PTEVA00840		ENSPVAG00000012694
			E	Pteropus vampyrus	PTEVA00210		A0A6P3Q7N5
			E	Phascolarctos cinereus	PHACI16002		A0A6P5IAJ8
			E	Phascolarctos cinereus	PHACI16003		A0A6P5IJR3
			E	Phascolarctos cinereus	PHACI16001		A0A6P5IJD3

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