Pairwise Orthologs for MOUSE04493

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE04493 (CAR14_MOUSE)

E Mus musculus | Caspase recruitment domain-containing protein 14 [Card14]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform MOUSE04492.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO02341		A0A401PJ73
			E	Chiloscyllium punctatum	CHIPU03616		A0A401S4C1
			E	Callorhinchus milii	CALMI08186		A0A4W3KGX4
			E	Lepisosteus oculatus	LEPOC02092		W5N8Y5
			E	Anguilla anguilla	ANGAN09601		XP_035256478
			E	Anabas testudineus	ANATE16300		A0A3Q1JGA4
			E	Seriola dumerili	SERDU17593		A0A3B4TE17
			E	Echeneis naucrates	ECHNA15444		A0A665UPY3
			E	Cynoglossus semilaevis	CYNSE30723		A0A3P8W9Q3
			E	Scophthalmus maximus	SCOMX31785		ENSSMAG00000011645.1
			E	Dicentrarchus labrax	DICLA44200		XP_051240945
			E	Gasterosteus aculeatus	GASAC16458		G3Q2I9
			E	Sparus aurata	SPAAU53959		A0A671TFA0
			E	Mola mola	MOLML14617		A0A3Q3WAF9
			E	Takifugu rubripes	TAKRU16008		A0A674PM94
			E	Tetraodon nigroviridis	TETNG15359		H3CG79
			E	Oryzias javanicus	ORYJA21397		ENSOJAG00000006361.1
			E	Oryzias latipes	ORYLA00154		ENSORLG00000001884
			E	Oryzias melastigma	ORYME27927		A0A3B3CSQ9
			E	Nothobranchius furzeri	NOTFU02193		XP_015822216
			E	Kryptolebias marmoratus	KRYMA21915		A0A3Q3BDK6
			E	Cyprinodon variegatus	CYPVA08110		A0A3Q2DX42
			E	Gambusia affinis	GAMAF23112		ENSGAFG00000007833.1
			E	Poecilia formosa	POEFO02296		A0A096M5J0
			E	Poecilia reticulata	POERE16130		A0A3P9N1U0

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