Pairwise Orthologs for MONDO29564

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MONDO29564 (F7F939)

E Monodelphis domestica | Lysyl oxidase homolog [LOX]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO17927		A0A401PPZ4
			E	Chiloscyllium punctatum	CHIPU02917		A0A401S2D4
			E	Lepisosteus oculatus	LEPOC07110		W5MQK7
			E	Anguilla anguilla	ANGAN37870		XP_035236351
			E	Seriola dumerili	SERDU25223		A0A3B4UYB8
			E	Scophthalmus maximus	SCOMX33581		A0A2U9BWJ3
			E	Dicentrarchus labrax	DICLA20690		A0A8C4GXR6
			E	Sparus aurata	SPAAU35280		A0A671YJ97
			E	Takifugu rubripes	TAKRU44093		H2RWL0
			E	Tetraodon nigroviridis	TETNG10447		H3CUN9
			E	Oryzias javanicus	ORYJA42644		A0A3S2MK87
			E	Oryzias melastigma	ORYME15362		A0A3B3BES7
			E	Nothobranchius furzeri	NOTFU03121		A0A1A8AU36
			E	Poecilia formosa	POEFO18039		A0A096M6D0
			E	Poecilia reticulata	POERE34318		A0A3P9PZS3
			E	Xiphophorus maculatus	XIPMA04842		M4ALB9
			E	Salarias fasciatus	SALFA14354		A0A672JLH2
			E	Neolamprologus brichardi	NEOBR12171		A0A3Q4H5U2
			E	Oreochromis aureus	OREAU05885		A0A668RZJ7
			E	Oreochromis niloticus	ORENI28344		I3KQL4
			E	Amphilophus citrinellus	AMPCI09955		A0A3Q0RIK1
			E	Amphiprion ocellaris	AMPOC30006		A0A3Q1BH81
			E	Amphiprion percula	AMPPE05150		A0A3P8U610
			E	Esox lucius	ESOLU40881		A0A3P9AFE0
			E	Astyanax mexicanus	ASTMX12842		A0A8B9JLI1

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