Pairwise Orthologs for MONDO29017

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MONDO29017 (F7DH53)

E Monodelphis domestica | Glycoprotein 2 [GP2]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Oreochromis aureus	OREAU11573		A0A668VSR8
			E	Tachyglossus aculeatus	TACAU22865		XP_038618733
			E	Procavia capensis	PROCA05508		ENSPCAG00000004986
			E	Loxodonta africana	LOXAF05417		G3SMH1
			E	Echinops telfairi	ECHTE16015		ENSETEG00000006558
			E	Ochotona princeps	OCHPR08738		ENSOPRG00000002792
			E	Dipodomys ordii	DIPOR08054		ENSDORG00000002062.2
			E	Fukomys damarensis	FUKDA10715		ENSFDAG00000013482.1
			E	Heterocephalus glaber	HETGA23013		ENSHGLG00100010519.1
			E	Cavia porcellus	CAVPO02939		H0UUN8
			E	Chinchilla lanigera	CHILA11302		A0A8C2VTQ5
			E	Octodon degus	OCTDE22675		ENSODEG00000001038.1
			E	Jaculus jaculus	JACJA17119		A0A8C5KQH1
			E	Mus musculus	MOUSE55787		GP2_MOUSE
			E	Rattus norvegicus	RATNO20933		A0A8I6G4W5
			E	Nannospalax galili	NANGA09693		A0A8C6R550
			E	Ictidomys tridecemlineatus	ICTTR12641		I3LZ56
			E	Cercocebus atys	CERAT31946		A0A2K5NQT3
			E	Chlorocebus sabaeus	CHLSB14474		A0A0D9R5U4
			E	Macaca fascicularis	MACFA24453		ENSMFAG00000041038.1
			E	Macaca mulatta	MACMU27234		F7FQD6
			E	Macaca nemestrina	MACNE37623		A0A2K6C9T5
			E	Mandrillus leucophaeus	MANLE19852		A0A2K5Y212
			E	Papio anubis	PAPAN16516		A0A096NH75
			E	Colobus angolensis palliatus	COLAP12775		A0A2K5IXK2

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