Pairwise Orthologs for MONDO14976

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MONDO14976 (F7D2B4)

E Monodelphis domestica | Diacylglycerol kinase [DGKE]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Acanthamoeba castellanii str. Neff	ACACA05073		L8H6A6
			E	Cavenderia fasciculata (strain SH3)	CAVFA09289		F4Q0G2
			E	Spizellomyces punctatus	SPIPN04997		SPPG_05267
			E	Spizellomyces punctatus (strain DAOM BR117)	SPIPD05517		A0A0L0HEK6
			E	Gonapodya prolifera (strain JEL478)	GONPJ03650		A0A139AQ96
			E	Creolimax fragrantissima	CREFR01595		CFRG1595
			E	Branchiostoma floridae	BRAFL30405		A0A9J7M6A3
			E	Branchiostoma lanceolatum	BRALA21937		BL14974
			E	Eptatretus burgeri	EPTBU02175		A0A8C4WWQ4
			E	Callorhinchus milii	CALMI44314		A0A4W3GV06
			E	Lepisosteus oculatus	LEPOC02087		W5N8W4
			E	Anguilla anguilla	ANGAN54944		XP_035253716
			E	Anabas testudineus	ANATE16304		A0A3Q1KF08
			E	Seriola dumerili	SERDU17601		A0A3B4TEH3
			E	Echeneis naucrates	ECHNA15449		A0A665UP31
			E	Cynoglossus semilaevis	CYNSE30728		A0A3P8WFQ9
			E	Scophthalmus maximus	SCOMX31779		A0A2U9BSE1
			E	Dicentrarchus labrax	DICLA44196		A0A8P4K278
			E	Gasterosteus aculeatus	GASAC16453		G3Q2I0
			E	Sparus aurata	SPAAU53993		A0A671THK2
			E	Mola mola	MOLML14621		A0A3Q3VZP5
			E	Takifugu rubripes	TAKRU15945		A0A674P274
			E	Tetraodon nigroviridis	TETNG15356		H3CG82
			E	Oryzias javanicus	ORYJA21437		ENSOJAG00000006700.1
			E	Oryzias latipes	ORYLA00150		ENSORLG00000001839

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