Pairwise Orthologs for MONDO01074

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MONDO01074 (A0A5F8GA49)

E Monodelphis domestica | BCL2 associated agonist of cell death [BAD]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Ornithorhynchus anatinus	ORNAN18907		A0A6I8NVP2
			E	Tachyglossus aculeatus	TACAU23873		XP_038620841
			E	Loxodonta africana	LOXAF04929		G3TP47
			E	Echinops telfairi	ECHTE03438		ENSETEG00000017242
			E	Dipodomys ordii	DIPOR16802		A0A1S3FL84
			E	Fukomys damarensis	FUKDA05198		A0A091DDU4
			E	Heterocephalus glaber	HETGA00835		ENSHGLG00100013083.1
			E	Cavia porcellus	CAVPO15618		H0V608
			E	Chinchilla lanigera	CHILA07144		A0A8C2W470
			E	Octodon degus	OCTDE22310		ENSODEG00000016677.1
			E	Jaculus jaculus	JACJA07908		A0A8C5P449
			E	Cricetulus griseus	CRIGR21660		ENSCGRG00000007940.1
			E	Mus musculus	MOUSE27064		BAD_MOUSE
			E	Rattus norvegicus	RATNO17666		O35147
			E	Nannospalax galili	NANGA22478		A0A8C6Q9N0
			E	Ictidomys tridecemlineatus	ICTTR16095		ENSSTOG00000008441
			E	Cercocebus atys	CERAT20801		A0A2K5M0B1
			E	Chlorocebus sabaeus	CHLSB00257		A0A0D9R491
			E	Macaca fascicularis	MACFA08653		ENSMFAG00000035492.1
			E	Macaca mulatta	MACMU11589		A0A1D5QBW1
			E	Macaca nemestrina	MACNE28855		A0A2K6E7I8
			E	Mandrillus leucophaeus	MANLE14471		A0A2K5XJR2
			E	Colobus angolensis palliatus	COLAP16113		A0A2K5HKW9
			E	Rhinopithecus bieti	RHIBE00939		A0A2K6N196
			E	Rhinopithecus roxellana	RHIRO26257		A0A2K6PUL3

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