Pairwise Orthologs for MACMU41046

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MACMU41046 (A0A5F7ZEH2)

E Macaca mulatta | Transmembrane p24 trafficking protein family membe [TMED8]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO17838		A0A401Q4S4
			E	Ornithorhynchus anatinus	ORNAN13166		F6RIN6
			E	Tachyglossus aculeatus	TACAU01474		XP_038618113
			E	Procavia capensis	PROCA10983		ENSPCAG00000003579
			E	Loxodonta africana	LOXAF16121		G3T108
			E	Echinops telfairi	ECHTE15209		ENSETEG00000015430
			E	Oryctolagus cuniculus	RABIT08983		ENSOCUG00000002144.3
			E	Ochotona princeps	OCHPR14156		ENSOPRG00000013965
			E	Dipodomys ordii	DIPOR01708		A0A1S3EU13
			E	Fukomys damarensis	FUKDA02383		ENSFDAG00000009583.1
			E	Heterocephalus glaber	HETGA09833		ENSHGLG00100003710.1
			E	Cavia aperea	CAVAP07832		ENSCAPG00000015073.1
			E	Cavia porcellus	CAVPO10277		H0UWL4
			E	Chinchilla lanigera	CHILA10527		A0A8C2V4V2
			E	Octodon degus	OCTDE01250		ENSODEG00000012850.1
			E	Jaculus jaculus	JACJA00381		A0A8C5KP71
			E	Cricetulus griseus	CRIGR06401		ENSCGRG00000010285.1
			E	Mus musculus	MOUSE08080		TMED8_MOUSE
			E	Rattus norvegicus	RATNO35699		A0A8I5ZNC2
			E	Nannospalax galili	NANGA08845		A0A8C6R2F1
			E	Ictidomys tridecemlineatus	ICTTR06998		ENSSTOG00000002808
			E	Cercocebus atys	CERAT12589		A0A2K5P2Y0
			E	Chlorocebus sabaeus	CHLSB11635		A0A0D9RHB1
			E	Macaca fascicularis	MACFA39723		ENSMFAG00000044023.1
			E	Macaca nemestrina	MACNE40443		A0A2K6DP96

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