Pairwise Orthologs for MACMU03030

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MACMU03030 (A0A5F8AEF1)

E Macaca mulatta | Poly [ADP-ribose] polymerase [PARP11]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Naegleria fowleri	NAEFO04732		FDP41_007328
			E	Scyliorhinus torazame	SCYTO02064		A0A401PHP2
			E	Callorhinchus milii	CALMI19080		A0A4W3IW14
			E	Anguilla anguilla	ANGAN57722		XP_035257835
			E	Anabas testudineus	ANATE02417		ENSATEG00000017899.1
			E	Seriola dumerili	SERDU03768		A0A3B4TDS3
			E	Echeneis naucrates	ECHNA42382		A0A665VXD7
			E	Cynoglossus semilaevis	CYNSE28850		A0A3P8VK18
			E	Scophthalmus maximus	SCOMX21229		ENSSMAG00000001220.1
			E	Dicentrarchus labrax	DICLA51507		A0A8P4FYP4
			E	Gasterosteus aculeatus	GASAC21607		G3Q895
			E	Sparus aurata	SPAAU50107		A0A671Z270
			E	Mola mola	MOLML00689		A0A3Q4AED8
			E	Takifugu rubripes	TAKRU18970		H2UQ11
			E	Tetraodon nigroviridis	TETNG07481		H3D0C8
			E	Oryzias javanicus	ORYJA04605		A0A3S2PAW8
			E	Oryzias latipes	ORYLA11097		ENSORLG00000014813
			E	Oryzias melastigma	ORYME26465		A0A3B3D6Q9
			E	Nothobranchius furzeri	NOTFU01642		A0A1A8VET5
			E	Kryptolebias marmoratus	KRYMA09516		A0A3Q3BB79
			E	Cyprinodon variegatus	CYPVA08772		A0A3Q2DYQ0
			E	Gambusia affinis	GAMAF26890		ENSGAFG00000008847.1
			E	Poecilia formosa	POEFO12028		A0A087XJM3
			E	Poecilia reticulata	POERE20716		A0A3P9N3U9
			E	Xiphophorus maculatus	XIPMA11560		M3ZTE8

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