Pairwise Orthologs for MACFA27517

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MACFA27517 (ENSMFAG00000041998.1)

E Macaca fascicularis

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Bodo saltans	BODSA08622		A0A0S4J7V2
			E	Naegleria fowleri	NAEFO01448		A0A6A5C5A0
			E	Branchiostoma floridae	BRAFL13603		A0A9J7L8A6
			E	Branchiostoma lanceolatum	BRALA19754		BL16512
			E	Petromyzon marinus	PETMA06834		S4RD80
			E	Eptatretus burgeri	EPTBU15401		A0A8C4NP78
			E	Scyliorhinus torazame	SCYTO07326		A0A401NS16
			E	Chiloscyllium punctatum	CHIPU07569		A0A401SFL7
			E	Callorhinchus milii	CALMI18675		A0A4W3HB36
			E	Lepisosteus oculatus	LEPOC13801		W5MVI9
			E	Anguilla anguilla	ANGAN45401		XP_035243783
			E	Anabas testudineus	ANATE03000		ENSATEG00000017825.1
			E	Seriola dumerili	SERDU07301		A0A3B4VKW7
			E	Echeneis naucrates	ECHNA03854		A0A665TX85
			E	Cynoglossus semilaevis	CYNSE03408		A0A3P8V0I3
			E	Scophthalmus maximus	SCOMX28053		ENSSMAG00000011001.1
			E	Dicentrarchus labrax	DICLA22146		A0A8C4HW87
			E	Gasterosteus aculeatus	GASAC04220		G3P4A8
			E	Sparus aurata	SPAAU40123		A0A671V0H4
			E	Mola mola	MOLML02491		A0A3Q4AC47
			E	Takifugu rubripes	TAKRU21695		H2SQS5
			E	Tetraodon nigroviridis	TETNG02112		H3D0M6
			E	Oryzias javanicus	ORYJA02467		ENSOJAG00000008117.1
			E	Oryzias latipes	ORYLA14059		ENSORLG00000007980
			E	Oryzias melastigma	ORYME00948		A0A3B3DCH5

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