Pairwise Orthologs for LOXAF20611

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene LOXAF20611 (G3T666)

E Loxodonta africana | Sphingomyelin phosphodiesterase acid like 3A [SMPDL3A]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Citrifermentans bemidjiense (strain ATCC BAA-1014 / DSM 16622 / JCM 12645 / Bem)	CITBB01457		WP_012529909
			E	Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500)	POLPP05383		D3BLI6
			E	Neolecta irregularis (strain DAH-3)	NEOID01596		A0A1U7LPC2
			E	Ajellomyces capsulatus (strain NAm1 / WU24)	AJECN09086		A6RHJ9
			E	Fomitopsis pinicola (strain FP-58527)	FOMPI04794		Fompi1.gm1.1414_g
			E	Allomyces macrogynus (strain ATCC 38327)	ALLM313217		A0A0L0SY65
			E	Mucor circinelloides	MUCCI02868		Genemark1.2985_g
			E	Syncephalastrum racemosum	SYNRA10455		A0A1X2H1Y3
			E	Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638)	CONC200827		A0A137PH86
			E	Eptatretus burgeri	EPTBU15847		A0A8C4QXZ5
			E	Scyliorhinus torazame	SCYTO06766		A0A401NHF5
			E	Chiloscyllium punctatum	CHIPU02093		A0A401RZY6
			E	Callorhinchus milii	CALMI24793		V9KTZ9
			E	Lepisosteus oculatus	LEPOC01163		W5NL37
			E	Anguilla anguilla	ANGAN24554		A0A0E9XRD0
			E	Anabas testudineus	ANATE31901		ENSATEG00000022889.1
			E	Seriola dumerili	SERDU25921		A0A3B4URS6
			E	Echeneis naucrates	ECHNA30494		A0A665UGA6
			E	Cynoglossus semilaevis	CYNSE26978		A0A3P8V1I2
			E	Scophthalmus maximus	SCOMX17945		A0A2U9CUR0
			E	Dicentrarchus labrax	DICLA17786		XP_051263907
			E	Sparus aurata	SPAAU62556		A0A671X8X8
			E	Mola mola	MOLML23069		A0A3Q3X621
			E	Takifugu rubripes	TAKRU14645		H2TVN7
			E	Tetraodon nigroviridis	TETNG04872		H3CCK6

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