Pairwise Orthologs for LATCH20019

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene LATCH20019 (H3BDE1)

E Latimeria chalumnae | Sphingosine-1-phosphate phosphatase 1 [SGPP1]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Entamoeba invadens IP1	ENTIV02161		XP_004260151
			E	Dactylellina haptotyla (strain CBS 200.50)	DACHA04943		S8BLB8
			E	Aspergillus oryzae (strain ATCC 42149 / RIB 40)	ASPOR08601		Q2U5J4
			E	Fusarium poae	FUSPO13498		A0A1B8AMU8
			E	Naumovozyma castellii (strain ATCC 76901 / BCRC 22586 / CBS 4309 / NBRC 1992 / NRRL Y-12630)	NAUCC01200		G0VAG1
			E	Saccharomyces cerevisiae (strain AWRI796)	YEASA00616		AWRI796_3000
			E	Saccharomyces cerevisiae (strain FostersO)	YEASO01161		A0A8H4FAD6
			E	Zygosaccharomyces rouxii	ZYGRO02603		A0A1Q2ZZ37
			E	Tremella mesenterica	TREME02321		estExt_fgeneshTM_pg.
			E	Rhodotorula graminis (strain WP1)	RHOGW01386		A0A194SEB2
			E	Branchiostoma floridae	BRAFL02670		C3XS20
			E	Petromyzon marinus	PETMA08333		S4RTM1
			E	Scyliorhinus torazame	SCYTO10118		A0A401P2X8
			E	Chiloscyllium punctatum	CHIPU11861		A0A401SSW0
			E	Callorhinchus milii	CALMI32094		A0A4W3GVZ0
			E	Lepisosteus oculatus	LEPOC15393		W5MVX1
			E	Anguilla anguilla	ANGAN00770		XP_035251942
			E	Anabas testudineus	ANATE29658		A0A7N6AFM9
			E	Seriola dumerili	SERDU00160		A0A3B4TNN1
			E	Echeneis naucrates	ECHNA41331		A0A665XA53
			E	Cynoglossus semilaevis	CYNSE17060		A0A3P8W6L2
			E	Dicentrarchus labrax	DICLA06010		A0A8P4KIJ4
			E	Gasterosteus aculeatus	GASAC00931		G3P9U1
			E	Sparus aurata	SPAAU04227		A0A671W4Y1
			E	Mola mola	MOLML25630		A0A3Q4BEJ0

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