Pairwise Orthologs for LATCH08811

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene LATCH08811 (H2ZUW9)

E Latimeria chalumnae | Glypican-1 [GPC1]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO12015		A0A401P3I3
			E	Chiloscyllium punctatum	CHIPU19135		A0A401RRF2
			E	Callorhinchus milii	CALMI00744		A0A4W3IVM8
			E	Lepisosteus oculatus	LEPOC04290		W5MEP4
			E	Anabas testudineus	ANATE17811		A0A3Q1JJW6
			E	Seriola dumerili	SERDU09500		A0A3B4UQ99
			E	Echeneis naucrates	ECHNA35403		A0A665TJX7
			E	Cynoglossus semilaevis	CYNSE20235		A0A3P8WS49
			E	Scophthalmus maximus	SCOMX03732		A0A2U9C1X7
			E	Dicentrarchus labrax	DICLA36561		A0A8C4HM47
			E	Gasterosteus aculeatus	GASAC12350		G3NTF5
			E	Sparus aurata	SPAAU69515		A0A671Y3I2
			E	Mola mola	MOLML03335		A0A3Q4AEE4
			E	Takifugu rubripes	TAKRU27597		A0A674NL99
			E	Tetraodon nigroviridis	TETNG01111		H3BXC5
			E	Oryzias javanicus	ORYJA24439		A0A437DFS0
			E	Oryzias latipes	ORYLA13270		ENSORLG00000011060
			E	Oryzias melastigma	ORYME14637		A0A3B3BTG5
			E	Nothobranchius furzeri	NOTFU33003		A0A9D3BBA7
			E	Kryptolebias marmoratus	KRYMA13416		A0A3Q3AQT7
			E	Cyprinodon variegatus	CYPVA12675		A0A3Q2E6A1
			E	Gambusia affinis	GAMAF16393		ENSGAFG00000010006.1
			E	Poecilia formosa	POEFO05523		A0A087X793
			E	Poecilia reticulata	POERE24861		A0A3P9QBY0
			E	Xiphophorus maculatus	XIPMA35947		M4A9F9

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