Pairwise Orthologs for LATCH08645

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene LATCH08645 (H3AE31)

E Latimeria chalumnae | procollagen galactosyltransferase [COLGALT1]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Petromyzon marinus	PETMA08036		S4RP27
			E	Scyliorhinus torazame	SCYTO15003		A0A401P5N9
			E	Chiloscyllium punctatum	CHIPU13927		A0A401SZ01
			E	Lepisosteus oculatus	LEPOC14795		W5MPT8
			E	Anabas testudineus	ANATE28537		ENSATEG00000023752.1
			E	Seriola dumerili	SERDU16604		A0A3B4USE5
			E	Cynoglossus semilaevis	CYNSE12207		A0A3P8VVW3
			E	Scophthalmus maximus	SCOMX14202		A0A2U9CQZ5
			E	Dicentrarchus labrax	DICLA47405		XP_051245249
			E	Gasterosteus aculeatus	GASAC08063		G3P781
			E	Sparus aurata	SPAAU02418		A0A671XT24
			E	Mola mola	MOLML16526		A0A3Q3WD61
			E	Tetraodon nigroviridis	TETNG10020		H3DMH7
			E	Oryzias latipes	ORYLA16596		ENSORLG00000006626
			E	Oryzias melastigma	ORYME17703		A0A3B3D462
			E	Nothobranchius furzeri	NOTFU07947		A0A1A8VBE7
			E	Kryptolebias marmoratus	KRYMA16932		A0A3Q3APR1
			E	Cyprinodon variegatus	CYPVA17936		A0A3Q2FBU5
			E	Gambusia affinis	GAMAF14534		A0A315V462
			E	Poecilia formosa	POEFO17588		A0A087XK61
			E	Poecilia reticulata	POERE31798		A0A3P9NCN7
			E	Xiphophorus maculatus	XIPMA10779		M4AFU1
			E	Salarias fasciatus	SALFA24454		A0A672IAE6
			E	Astatotilapia calliptera	ASTCA30123		A0A3P8QRN2
			E	Haplochromis burtoni	HAPBU24865		A0A3Q2UW80

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