Pairwise Orthologs for JACJA20149

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene JACJA20149 (A0A8C5K8T1)

E Jaculus jaculus | choline-phosphate cytidylyltransferase [Pcyt1a]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Rhizophagus irregularis (strain DAOM 197198w)	RHIIW14544		A0A015IRC9
			E	Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638)	CONC202541		A0A137PC48
			E	Scyliorhinus torazame	SCYTO14889		A0A401P276
			E	Chiloscyllium punctatum	CHIPU19815		A0A401RTR2
			E	Callorhinchus milii	CALMI43758		A0A4W3IL20
			E	Lepisosteus oculatus	LEPOC04454		W5MPY7
			E	Anabas testudineus	ANATE27187		A0A3Q1ISG9
			E	Seriola dumerili	SERDU14331		A0A3B4UL44
			E	Echeneis naucrates	ECHNA33468		A0A665V6A8
			E	Cynoglossus semilaevis	CYNSE18406		ENSCSEG00000013124.1
			E	Scophthalmus maximus	SCOMX29316		A0A2U9BKP4
			E	Dicentrarchus labrax	DICLA00879		A0A8C4EGC4
			E	Gasterosteus aculeatus	GASAC09065		G3PRY1
			E	Sparus aurata	SPAAU38777		A0A671Z3T8
			E	Mola mola	MOLML19780		A0A3Q3W7W5
			E	Takifugu rubripes	TAKRU33206		A0A674N338
			E	Tetraodon nigroviridis	TETNG05294		H3D0I9
			E	Oryzias javanicus	ORYJA28210		ENSOJAG00000017391.1
			E	Oryzias latipes	ORYLA06823		A0A3B3HBH1
			E	Oryzias melastigma	ORYME25652		A0A3B3DSC6
			E	Nothobranchius furzeri	NOTFU15136		A0A1A8B4Y3
			E	Kryptolebias marmoratus	KRYMA14753		A0A3Q3A4X4
			E	Cyprinodon variegatus	CYPVA16062		A0A3Q2EFL9
			E	Gambusia affinis	GAMAF09686		ENSGAFG00000007333.1
			E	Poecilia formosa	POEFO13146		A0A087XTN3

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