Pairwise Orthologs for ICTTR06947

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene ICTTR06947 (I3N9H4)

E Ictidomys tridecemlineatus | PNMA family member 1 [PNMA1]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Oryzias javanicus	ORYJA31797		ENSOJAG00000009630.1
			E	Sinocyclocheilus grahami	SINGR69924		A0A672N0F5
			E	Loxodonta africana	LOXAF16070		G3SN85
			E	Echinops telfairi	ECHTE10186		ENSETEG00000000603
			E	Oryctolagus cuniculus	RABIT09035		ENSOCUG00000007289.2
			E	Dipodomys ordii	DIPOR01940		A0A1S3FAC2
			E	Heterocephalus glaber	HETGA01589		A0A0N8ESJ0
			E	Cavia aperea	CAVAP07782		ENSCAPG00000006995.1
			E	Cavia porcellus	CAVPO10551		H0VVB5
			E	Jaculus jaculus	JACJA00450		A0A8C5JY44
			E	Cricetulus griseus	CRIGR13737		A0A8C2LVI2
			E	Mus musculus	MOUSE09557		PNMA1_MOUSE
			E	Rattus norvegicus	RATNO35552		PNMA1_RAT
			E	Nannospalax galili	NANGA11424		A0A8C6R6E4
			E	Cercocebus atys	CERAT12475		A0A2K5KU88
			E	Chlorocebus sabaeus	CHLSB11586		A0A0D9SDY2
			E	Macaca fascicularis	MACFA39608		A0A8J8YBB7
			E	Macaca mulatta	MACMU42550		A0A8J8YDY0
			E	Mandrillus leucophaeus	MANLE21542		A0A2K5XJN9
			E	Papio anubis	PAPAN36871		A0A096MKX0
			E	Colobus angolensis palliatus	COLAP01035		A0A2K5HCJ4
			E	Rhinopithecus bieti	RHIBE05573		A0A2K6JXR3
			E	Rhinopithecus roxellana	RHIRO02423		A0A2K6NJF8
			E	Gorilla gorilla gorilla	GORGO07725		G3QTJ8
			E	Homo sapiens	HUMAN20201		PNMA1_HUMAN

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