Pairwise Orthologs for ICTPU23332

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene ICTPU23332 (ENSIPUG00000018178.1)

E Ictalurus punctatus

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Mycolicibacterium rhodesiae (strain NBB3)	MYCRN03949		WP_014212391
			E	Petromyces alliaceus	PETAA10353		A0A5N6FIP0
			E	Rhinopithecus roxellana	RHIRO41583		A0A2K6PGQ6
			E	Cebus imitator	CEBIM36856		A0A2K5RPZ0
			E	Sus scrofa	PIGXX33798		A0A8D0PK54
			E	Pristionchus pacificus	PRIPA17407		WBGene00107152
			E	Strigamia maritima	STRMM02346		T1IRC4
			E	Folsomia candida	FOLCA09308		A0A226EEB2
			E	Melitaea cinxia	MELCN10417		MCINX011308
			E	Bactrocera dorsalis	BACDO04501		XP_049302885
			E	Linepithema humile	LINHU09713		XP_012223775
			E	Acyrthosiphon pisum	ACYPI30484		A0A8R2JPI6
			E	Capitella teleta	CAPTE11701		R7TRJ9
			E	Capitella sp. 1	CAPI118758		estExt_fgenesh1_pg.C
			E	Trichoplax adhaerens	TRIAD03411		B3S845
			E	Beta vulgaris subsp. vulgaris	BETVV27206		BVRB_2g025800
			E	Drosophila suzukii	DROSZ13759		LOC108013855
			E	Drosophila suzukii	DROSZ07428		LOC108008129
			E	Drosophila suzukii	DROSZ07430		LOC108008131
			E	Drosophila suzukii	DROSZ07429		XP_016927677
			B	Chamaesiphon minutus (strain ATCC 27169 / PCC 6605)	CHAP605657		AFY96966
			B	Anabaena cylindrica (strain ATCC 27899 / PCC 7122)	ANACC00504		Anacy_0526
			B	Synechococcus sp. (strain WH7805)	SYNPV01160		EAR19433
			E	Bodo saltans	BODSA16427		A0A0S4KJ23
			E	Monosiga brevicollis	MONBE08484		A9V1Y8

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