Pairwise Orthologs for HUMAN99307

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN99307 (F1T0I1)

E Homo sapiens | Protein transport protein sec16 [SEC16A]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform HUMAN99306.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500)	POLPP11632		D3BG35
			E	Thecamonas trahens ATCC 50062	THETB00347		A0A0L0D8E5
			E	Diacronema lutheri	DIALT01584		A0A8J6CEP8
			E	Schizosaccharomyces japonicus (strain yFS275 / FY16936)	SCHJY01577		B6JV78
			E	Protomyces lactucaedebilis	PROLT01275		A0A1Y2FNB1
			E	Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804)	SAICN06030		A0A0E9NPP3
			E	Dactylellina haptotyla (strain CBS 200.50)	DACHA06633		S8ACG6
			E	Exophiala mesophila	EXOME06333		A0A0D1ZWC0
			E	Endocarpon pusillum (strain Z07020 / HMAS-L-300199)	ENDPU03953		U1HK14
			E	Aspergillus brasiliensis (strain CBS 101740 / IMI 381727 / IBT 21946)	ASPBC09517		A0A1L9UC37
			E	Aspergillus aculeatus	ASPAC08166		gw1.14.8.1
			E	Aspergillus niger	ASPNG03907		A0A117E0U1
			E	Aspergillus terreus (strain NIH 2624 / FGSC A1156)	ASPTN01193		SEC16_ASPTN
			E	Emericella nidulans	EMEND04666		AN6615
			E	Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)	EMENI08691		SEC16_EMENI
			E	Aspergillus tubingensis (strain CBS 134.48)	ASPTC09668		A0A1L9MSE8
			E	Penicillium chrysogenum	PENCH09743		e_gw1.6.373.1
			E	Penicillium rubens (strain ATCC 28089 / DSM 1075 / NRRL 1951 / Wisconsin 54-1255)	PENRW07307		B6HGP0
			E	Penicillium decumbens	PENDC02697		A0A1V6PFE4
			E	Penicillium italicum	PENIT07925		A0A0A2L2P9
			E	Penicillium nalgiovense	PENNA02261		A0A1V6YZU9
			E	Penicillium patulum	PENPA08235		A0A135LN76
			E	Penicillium roqueforti (strain FM164)	PENRF10776		W6QN70
			E	Arthroderma otae (strain ATCC MYA-4605 / CBS 113480)	ARTOC03120		C5FKS9
			E	Arthroderma gypseum (strain ATCC MYA-4604 / CBS 118893)	ARTGP00289		E5QYQ6

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