Pairwise Orthologs for HUMAN99169

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN99169 (VAV2_HUMAN)

E Homo sapiens | Guanine nucleotide exchange factor VAV2 [VAV2]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform HUMAN99170.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Petromyzon marinus	PETMA00830		S4RA59
			E	Callorhinchus milii	CALMI26359		A0A4W3JBR2
			E	Lepisosteus oculatus	LEPOC08551		W5MAI5
			E	Anguilla anguilla	ANGAN47823		XP_035247350
			E	Anabas testudineus	ANATE30632		A0A3Q1H6A5
			E	Seriola dumerili	SERDU26890		A0A3B4V9R9
			E	Echeneis naucrates	ECHNA51084		A0A665V7S8
			E	Cynoglossus semilaevis	CYNSE07607		A0A3P8V050
			E	Scophthalmus maximus	SCOMX09272		ENSSMAG00000015647.1
			E	Dicentrarchus labrax	DICLA20978		XP_051269410
			E	Gasterosteus aculeatus	GASAC05088		G3Q2C0
			E	Sparus aurata	SPAAU32961		A0A671V1D0
			E	Mola mola	MOLML06991		A0A3Q3WDR1
			E	Takifugu rubripes	TAKRU44755		A0A674N950
			E	Tetraodon nigroviridis	TETNG10925		H3DKD4
			E	Oryzias javanicus	ORYJA07384		ENSOJAG00000020643.1
			E	Oryzias latipes	ORYLA02846		ENSORLG00000012202
			E	Oryzias melastigma	ORYME19353		A0A3B3DV12
			E	Nothobranchius furzeri	NOTFU02926		A0A1A7ZAG3
			E	Kryptolebias marmoratus	KRYMA16993		A0A3Q3AYH1
			E	Cyprinodon variegatus	CYPVA02860		A0A3Q2E9P8
			E	Gambusia affinis	GAMAF02658		ENSGAFG00000003539.1
			E	Poecilia formosa	POEFO11528		A0A087XZJ7
			E	Poecilia reticulata	POERE05606		A0A3P9QF28
			E	Xiphophorus maculatus	XIPMA33801		A0A3B5R927

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